Analysis of interatomic Contacts of Structural Units in PDB entry:
3E59


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3E59 entry

There are 4 chains in PDB entry 3E59 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 7LEU 317
B
 THR 8PRO 318
C
 THR 8PRO 318
D
 GLU 6PRO 318
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 53 helices in PDB entry 3E59. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 19Right-handed alpha
Helix 2
2
A
24 29Right-handed alpha
Helix 3
3
A
32 54Right-handed alpha
Helix 4
4
A
81 102Right-handed alpha
Helix 5
5
A
113 118Right-handed alpha
Helix 6
6
A
119 121Right-handed 310
Helix 7
7
A
124 143Right-handed alpha
Helix 8
8
A
151 162Right-handed 310
Helix 9
9
A
164 177Right-handed alpha
Helix 10
10
A
179 188Right-handed alpha
Helix 11
11
A
190 209Right-handed alpha
Helix 12
12
A
216 246Right-handed alpha
Helix 13
13
A
277 281Right-handed 310
Helix 14
14
A
294 301Right-handed alpha
Helix 15
15
B
8 19Right-handed alpha
Helix 16
16
B
32 55Right-handed alpha
Helix 17
17
B
81 100Right-handed alpha
Helix 18
18
B
113 118Right-handed alpha
Helix 19
19
B
119 122Right-handed 310
Helix 20
20
B
124 142Right-handed alpha
Helix 21
21
B
151 162Right-handed 310
Helix 22
22
B
164 177Right-handed alpha
Helix 23
23
B
179 188Right-handed alpha
Helix 24
24
B
190 209Right-handed alpha
Helix 25
25
B
216 246Right-handed alpha
Helix 26
26
B
277 281Right-handed 310
Helix 27
27
B
294 300Right-handed alpha
Helix 28
28
C
8 19Right-handed alpha
Helix 29
29
C
33 54Right-handed alpha
Helix 30
30
C
81 102Right-handed alpha
Helix 31
31
C
113 118Right-handed alpha
Helix 32
32
C
119 121Right-handed 310
Helix 33
33
C
124 142Right-handed alpha
Helix 34
34
C
151 162Right-handed 310
Helix 35
35
C
164 177Right-handed alpha
Helix 36
36
C
179 189Right-handed alpha
Helix 37
37
C
190 209Right-handed alpha
Helix 38
38
C
216 246Right-handed alpha
Helix 39
39
C
277 281Right-handed 310
Helix 40
40
C
294 301Right-handed alpha
Helix 41
41
D
8 19Right-handed alpha
Helix 42
42
D
24 29Right-handed alpha
Helix 43
43
D
32 55Right-handed alpha
Helix 44
44
D
81 102Right-handed alpha
Helix 45
45
D
117 121Right-handed 310
Helix 46
46
D
124 143Right-handed alpha
Helix 47
47
D
151 162Right-handed 310
Helix 48
48
D
164 177Right-handed alpha
Helix 49
49
D
179 188Right-handed alpha
Helix 50
50
D
190 209Right-handed alpha
Helix 51
51
D
216 246Right-handed alpha
Helix 52
52
D
277 281Right-handed 310
Helix 53
53
D
294 301Right-handed alpha
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There are 8 sheets in PDB entry 3E59. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 149first strand
Strand 2
A
106 110parallel
Strand 3
A
58 62parallel
Strand 4
A
250 253parallel
Strand 5
A
263 265parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
290 293first strand
Strand 2
A
282 286anti-parallel
Strand 3
A
311 317parallel
Strand 4
A
304 308anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
147 150first strand
Strand 2
B
106 111parallel
Strand 3
B
58 62parallel
Strand 4
B
250 253parallel
Strand 5
B
263 265parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
289 293first strand
Strand 2
B
282 286anti-parallel
Strand 3
B
311 316parallel
Strand 4
B
304 308anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
147 150first strand
Strand 2
C
106 111parallel
Strand 3
C
58 62parallel
Strand 4
C
250 253parallel
Strand 5
C
263 265parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
289 293first strand
Strand 2
C
282 286anti-parallel
Strand 3
C
311 316parallel
Strand 4
C
304 308anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
147 150first strand
Strand 2
D
106 111parallel
Strand 3
D
58 62parallel
Strand 4
D
250 253parallel
Strand 5
D
263 265parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
289 293first strand
Strand 2
D
282 286anti-parallel
Strand 3
D
311 317parallel
Strand 4
D
304 308anti-parallel
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