Analysis of interatomic Contacts of Structural Units in PDB entry:
3E5L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3E5L entry

There is 1 chain in PDB entry 3E5L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 7HIS 400
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 3E5L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
24 32Right-handed alpha
Helix 2
2
A
50 60Right-handed alpha
Helix 3
3
A
93 106Right-handed alpha
Helix 4
4
A
107 113Right-handed alpha
Helix 5
5
A
114 133Right-handed alpha
Helix 6
6
A
138 142Right-handed alpha
Helix 7
7
A
144 155Right-handed alpha
Helix 8
8
A
158 174Right-handed alpha
Helix 9
9
A
178 203Right-handed alpha
Helix 10
10
A
207 215Right-handed alpha
Helix 11
11
A
223 255Right-handed alpha
Helix 12
12
A
256 266Right-handed alpha
Helix 13
13
A
269 282Right-handed alpha
Helix 14
14
A
312 317Right-handed alpha
Helix 15
15
A
343 347Right-handed 310
Helix 16
16
A
350 369Right-handed alpha
Helix 17
17
A
377 381Right-handed 310
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There are 3 sheets in PDB entry 3E5L. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 38first strand
Strand 2
A
44 48anti-parallel
Strand 3
A
308 311parallel
Strand 4
A
288 292anti-parallel
Strand 5
A
63 64anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
136 137first strand
Strand 2
A
396 398anti-parallel
Strand 3
A
373 374anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
296 298first strand
Strand 2
A
301 303anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il