Analysis of interatomic Contacts of Structural Units in PDB entry:
3E5Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3E5Z entry

There are 2 chains in PDB entry 3E5Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2HIS 291
B
 THR 2HIS 291
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 3E5Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
7 14Right-handed 310
Helix 2
2
A
37 39Right-handed 310
Helix 3
3
A
48 50Right-handed 310
Helix 4
4
A
134 139Right-handed alpha
Helix 5
5
A
140 143Right-handed 310
Helix 6
6
B
7 14Right-handed 310
Helix 7
7
B
37 39Right-handed 310
Helix 8
8
B
134 139Right-handed alpha
Helix 9
9
B
140 143Right-handed 310
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There are 14 sheets in PDB entry 3E5Z. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 5first strand
Strand 2
A
248 253anti-parallel
Strand 3
A
238 242anti-parallel
Strand 4
A
231 235anti-parallel
Strand 5
A
223 225anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
21 24first strand
Strand 2
A
278 283anti-parallel
Strand 3
A
270 275anti-parallel
Strand 4
A
260 264anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 36first strand
Strand 2
A
41 46anti-parallel
Strand 3
A
51 56anti-parallel
Strand 4
A
61 65anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
71 76first strand
Strand 2
A
82 86anti-parallel
Strand 3
A
91 95anti-parallel
Strand 4
A
102 106anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
108 109first strand
Strand 2
A
112 113anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
120 122first strand
Strand 2
A
128 132anti-parallel
Strand 3
A
154 158anti-parallel
Strand 4
A
164 168anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
174 179first strand
Strand 2
A
185 189anti-parallel
Strand 3
A
194 200anti-parallel
Strand 4
A
206 213anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 5first strand
Strand 2
B
248 253anti-parallel
Strand 3
B
238 242anti-parallel
Strand 4
B
231 235anti-parallel
Strand 5
B
223 225anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
21 24first strand
Strand 2
B
278 283anti-parallel
Strand 3
B
270 275anti-parallel
Strand 4
B
260 264anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
30 36first strand
Strand 2
B
41 46anti-parallel
Strand 3
B
51 56anti-parallel
Strand 4
B
61 65anti-parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
71 76first strand
Strand 2
B
82 86anti-parallel
Strand 3
B
91 95anti-parallel
Strand 4
B
103 106anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
108 109first strand
Strand 2
B
112 113anti-parallel
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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
120 122first strand
Strand 2
B
128 131anti-parallel
Strand 3
B
155 158anti-parallel
Strand 4
B
164 168anti-parallel
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There are 4 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
174 179first strand
Strand 2
B
185 189anti-parallel
Strand 3
B
194 200anti-parallel
Strand 4
B
206 213anti-parallel
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