Analysis of interatomic Contacts of Structural Units in PDB entry:
3E7D


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3E7D entry

There are 4 chains in PDB entry 3E7D (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 4SER 205
B
 TYR 4ARG 207
C
 TYR 4GLU 206
D
 TYR 4ARG 207
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 51 helices in PDB entry 3E7D. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
7 23Right-handed alpha
Helix 2
2
A
29 31Right-handed 310
Helix 3
3
A
32 44Right-handed alpha
Helix 4
4
A
45 50Right-handed 310
Helix 5
5
A
57 68Right-handed alpha
Helix 6
6
A
76 83Right-handed alpha
Helix 7
7
A
84 88Right-handed 310
Helix 8
8
A
102 111Right-handed alpha
Helix 9
9
A
113 118Right-handed alpha
Helix 10
10
A
119 126Right-handed 310
Helix 11
11
A
136 149Right-handed alpha
Helix 12
12
A
166 177Right-handed alpha
Helix 13
13
A
192 205Right-handed alpha
Helix 14
14
B
7 23Right-handed alpha
Helix 15
15
B
29 31Right-handed 310
Helix 16
16
B
32 44Right-handed alpha
Helix 17
17
B
45 50Right-handed 310
Helix 18
18
B
57 68Right-handed alpha
Helix 19
19
B
76 83Right-handed alpha
Helix 20
20
B
84 88Right-handed 310
Helix 21
21
B
102 111Right-handed alpha
Helix 22
22
B
113 118Right-handed alpha
Helix 23
23
B
119 123Right-handed 310
Helix 24
24
B
136 149Right-handed alpha
Helix 25
25
B
166 177Right-handed alpha
Helix 26
26
B
192 205Right-handed alpha
Helix 27
27
C
7 23Right-handed alpha
Helix 28
28
C
29 44Right-handed alpha
Helix 29
29
C
45 50Right-handed 310
Helix 30
30
C
57 68Right-handed alpha
Helix 31
31
C
76 83Right-handed alpha
Helix 32
32
C
84 88Right-handed 310
Helix 33
33
C
102 111Right-handed alpha
Helix 34
34
C
113 118Right-handed alpha
Helix 35
35
C
119 126Right-handed 310
Helix 36
36
C
136 149Right-handed alpha
Helix 37
37
C
166 177Right-handed alpha
Helix 38
38
C
192 205Right-handed alpha
Helix 39
39
D
7 23Right-handed alpha
Helix 40
40
D
29 31Right-handed 310
Helix 41
41
D
32 44Right-handed alpha
Helix 42
42
D
47 51Right-handed alpha
Helix 43
43
D
57 68Right-handed alpha
Helix 44
44
D
76 83Right-handed alpha
Helix 45
45
D
84 88Right-handed 310
Helix 46
46
D
102 111Right-handed alpha
Helix 47
47
D
113 118Right-handed alpha
Helix 48
48
D
119 126Right-handed 310
Helix 49
49
D
136 149Right-handed alpha
Helix 50
50
D
166 177Right-handed alpha
Helix 51
51
D
192 205Right-handed alpha
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There are 4 sheets in PDB entry 3E7D. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 54first strand
Strand 2
A
183 186anti-parallel
Strand 3
A
156 159parallel
Strand 4
A
130 133parallel
Strand 5
A
72 74parallel
Strand 6
A
94 95parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
52 54first strand
Strand 2
B
183 186anti-parallel
Strand 3
B
156 159parallel
Strand 4
B
130 133parallel
Strand 5
B
72 74parallel
Strand 6
B
94 95parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
52 54first strand
Strand 2
C
183 186anti-parallel
Strand 3
C
156 159parallel
Strand 4
C
130 133parallel
Strand 5
C
72 74parallel
Strand 6
C
94 95parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
52 54first strand
Strand 2
D
183 186anti-parallel
Strand 3
D
156 159parallel
Strand 4
D
130 133parallel
Strand 5
D
72 74parallel
Strand 6
D
94 95parallel
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