Analysis of interatomic Contacts of Structural Units in PDB entry:
3E7G

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3E7G entry

There are 4 chains in PDB entry 3E7G (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 83	ASP 503
B	ARG 83	ASP 503
C	ARG 83	LYS 505
D	ARG 83	ASP 503

There are 80 helices in PDB entry 3E7G. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	99	104	Right-handed 310
Helix 2	2	A	122	126	Right-handed 310
Helix 3	3	A	135	153	Right-handed alpha
Helix 4	4	A	158	176	Right-handed alpha
Helix 5	5	A	182	196	Right-handed alpha
Helix 6	6	A	202	206	Right-handed 310
Helix 7	7	A	219	236	Right-handed alpha
Helix 8	8	A	237	239	Right-handed 310
Helix 9	9	A	283	293	Right-handed alpha
Helix 10	10	A	322	326	Right-handed 310
Helix 11	11	A	336	343	Right-handed 310
Helix 12	12	A	374	380	Right-handed alpha
Helix 13	13	A	380	385	Right-handed alpha
Helix 14	14	A	391	400	Right-handed alpha
Helix 15	15	A	405	408	Right-handed 310
Helix 16	16	A	409	429	Right-handed alpha
Helix 17	17	A	435	455	Right-handed alpha
Helix 18	18	A	460	465	Right-handed alpha
Helix 19	19	A	469	478	Right-handed 310
Helix 20	20	A	494	499	Right-handed alpha
Helix 21	21	B	99	104	Right-handed 310
Helix 22	22	B	122	126	Right-handed 310
Helix 23	23	B	135	153	Right-handed alpha
Helix 24	24	B	158	177	Right-handed alpha
Helix 25	25	B	182	196	Right-handed alpha
Helix 26	26	B	202	206	Right-handed 310
Helix 27	27	B	219	236	Right-handed alpha
Helix 28	28	B	237	239	Right-handed 310
Helix 29	29	B	283	293	Right-handed alpha
Helix 30	30	B	322	326	Right-handed 310
Helix 31	31	B	336	343	Right-handed 310
Helix 32	32	B	374	380	Right-handed alpha
Helix 33	33	B	380	385	Right-handed alpha
Helix 34	34	B	391	399	Right-handed alpha
Helix 35	35	B	405	408	Right-handed 310
Helix 36	36	B	409	429	Right-handed alpha
Helix 37	37	B	435	455	Right-handed alpha
Helix 38	38	B	460	465	Right-handed alpha
Helix 39	39	B	469	478	Right-handed 310
Helix 40	40	B	494	499	Right-handed alpha
Helix 41	41	C	99	104	Right-handed 310
Helix 42	42	C	122	126	Right-handed 310
Helix 43	43	C	135	152	Right-handed alpha
Helix 44	44	C	158	177	Right-handed alpha
Helix 45	45	C	182	196	Right-handed alpha
Helix 46	46	C	202	206	Right-handed 310
Helix 47	47	C	219	236	Right-handed alpha
Helix 48	48	C	237	239	Right-handed 310
Helix 49	49	C	283	293	Right-handed alpha
Helix 50	50	C	322	326	Right-handed 310
Helix 51	51	C	336	343	Right-handed 310
Helix 52	52	C	374	380	Right-handed alpha
Helix 53	53	C	380	385	Right-handed alpha
Helix 54	54	C	391	399	Right-handed alpha
Helix 55	55	C	405	408	Right-handed 310
Helix 56	56	C	409	429	Right-handed alpha
Helix 57	57	C	435	455	Right-handed alpha
Helix 58	58	C	460	465	Right-handed alpha
Helix 59	59	C	469	478	Right-handed 310
Helix 60	60	C	494	498	Right-handed 310
Helix 61	61	D	99	103	Right-handed 310
Helix 62	62	D	122	126	Right-handed 310
Helix 63	63	D	135	152	Right-handed alpha
Helix 64	64	D	158	177	Right-handed alpha
Helix 65	65	D	182	196	Right-handed alpha
Helix 66	66	D	202	206	Right-handed 310
Helix 67	67	D	219	236	Right-handed alpha
Helix 68	68	D	237	239	Right-handed 310
Helix 69	69	D	283	293	Right-handed alpha
Helix 70	70	D	322	326	Right-handed 310
Helix 71	71	D	336	343	Right-handed 310
Helix 72	72	D	374	380	Right-handed alpha
Helix 73	73	D	380	385	Right-handed alpha
Helix 74	74	D	391	399	Right-handed alpha
Helix 75	75	D	405	408	Right-handed 310
Helix 76	76	D	409	429	Right-handed alpha
Helix 77	77	D	435	455	Right-handed alpha
Helix 78	78	D	460	465	Right-handed alpha
Helix 79	79	D	469	478	Right-handed 310
Helix 80	80	D	494	498	Right-handed 310

There are 24 sheets in PDB entry 3E7G. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	85	88	first strand
Strand 2	A	95	98	anti-parallel

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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	210	213	first strand
Strand 2	A	243	246	parallel
Strand 3	A	369	370	anti-parallel
Strand 4	A	351	352	anti-parallel

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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	258	259	first strand
Strand 2	A	307	310	anti-parallel
Strand 3	A	317	319	anti-parallel

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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	269	271	first strand
Strand 2	A	277	279	anti-parallel

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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	328	330	first strand
Strand 2	A	345	347	anti-parallel

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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	362	364	first strand
Strand 2	A	356	359	anti-parallel
Strand 3	A	488	490	anti-parallel

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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	85	88	first strand
Strand 2	B	95	98	anti-parallel

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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	210	213	first strand
Strand 2	B	243	246	parallel
Strand 3	B	369	370	anti-parallel
Strand 4	B	351	352	anti-parallel

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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	258	259	first strand
Strand 2	B	307	310	anti-parallel
Strand 3	B	317	319	anti-parallel

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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	269	271	first strand
Strand 2	B	277	279	anti-parallel

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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	328	330	first strand
Strand 2	B	345	347	anti-parallel

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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	362	364	first strand
Strand 2	B	356	359	anti-parallel
Strand 3	B	488	490	anti-parallel

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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	85	88	first strand
Strand 2	C	95	98	anti-parallel

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There are 4 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	210	213	first strand
Strand 2	C	243	246	parallel
Strand 3	C	369	370	anti-parallel
Strand 4	C	351	352	anti-parallel

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There are 3 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	258	259	first strand
Strand 2	C	307	310	anti-parallel
Strand 3	C	317	319	anti-parallel

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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	269	271	first strand
Strand 2	C	277	279	anti-parallel

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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	328	330	first strand
Strand 2	C	345	347	anti-parallel

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There are 3 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	362	364	first strand
Strand 2	C	356	359	anti-parallel
Strand 3	C	488	490	anti-parallel

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There are 2 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	85	88	first strand
Strand 2	D	95	98	anti-parallel

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There are 4 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	210	213	first strand
Strand 2	D	243	246	parallel
Strand 3	D	369	370	anti-parallel
Strand 4	D	351	352	anti-parallel

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There are 3 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	258	259	first strand
Strand 2	D	307	310	anti-parallel
Strand 3	D	317	319	anti-parallel

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There are 2 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	269	271	first strand
Strand 2	D	277	279	anti-parallel

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There are 2 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	328	330	first strand
Strand 2	D	345	347	anti-parallel

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There are 3 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	362	364	first strand
Strand 2	D	356	359	anti-parallel
Strand 3	D	488	490	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3E7G

Analysis of interatomic Contacts of Structural Units in PDB entry:
3E7G