Analysis of interatomic Contacts of Structural Units in PDB entry:
3E7J


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3E7J entry

There are 2 chains in PDB entry 3E7J (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 30ARG 772
B
 ASP 30ARG 772
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 57 helices in PDB entry 3E7J. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
54 59Right-handed 310
Helix 2
2
A
60 67Right-handed alpha
Helix 3
3
A
70 81Right-handed alpha
Helix 4
4
A
94 100Right-handed alpha
Helix 5
5
A
103 119Right-handed alpha
Helix 6
6
A
120 138Right-handed alpha
Helix 7
7
A
146 164Right-handed alpha
Helix 8
8
A
165 168Right-handed 310
Helix 9
9
A
169 185Right-handed alpha
Helix 10
10
A
201 204Right-handed 310
Helix 11
11
A
205 210Right-handed alpha
Helix 12
12
A
210 219Right-handed alpha
Helix 13
13
A
224 237Right-handed alpha
Helix 14
14
A
237 246Right-handed alpha
Helix 15
15
A
247 249Right-handed 310
Helix 16
16
A
253 276Right-handed alpha
Helix 17
17
A
282 288Right-handed 310
Helix 18
18
A
289 295Right-handed alpha
Helix 19
19
A
318 330Right-handed alpha
Helix 20
20
A
331 340Right-handed alpha
Helix 21
21
A
345 347Right-handed 310
Helix 22
22
A
348 356Right-handed alpha
Helix 23
23
A
364 368Right-handed 310
Helix 24
24
A
438 444Right-handed alpha
Helix 25
25
A
447 451Right-handed 310
Helix 26
26
A
495 501Right-handed alpha
Helix 27
27
A
531 534Right-handed 310
Helix 28
28
A
612 614Right-handed 310
Helix 29
29
B
54 59Right-handed 310
Helix 30
30
B
60 67Right-handed alpha
Helix 31
31
B
68 70Right-handed 310
Helix 32
32
B
71 81Right-handed alpha
Helix 33
33
B
94 100Right-handed alpha
Helix 34
34
B
103 119Right-handed alpha
Helix 35
35
B
120 138Right-handed alpha
Helix 36
36
B
146 164Right-handed alpha
Helix 37
37
B
165 168Right-handed 310
Helix 38
38
B
169 185Right-handed alpha
Helix 39
39
B
201 204Right-handed 310
Helix 40
40
B
205 210Right-handed alpha
Helix 41
41
B
210 219Right-handed alpha
Helix 42
42
B
224 237Right-handed alpha
Helix 43
43
B
237 246Right-handed alpha
Helix 44
44
B
247 249Right-handed 310
Helix 45
45
B
253 276Right-handed alpha
Helix 46
46
B
282 288Right-handed 310
Helix 47
47
B
289 295Right-handed alpha
Helix 48
48
B
318 330Right-handed alpha
Helix 49
49
B
331 340Right-handed alpha
Helix 50
50
B
345 347Right-handed 310
Helix 51
51
B
348 356Right-handed alpha
Helix 52
52
B
364 368Right-handed 310
Helix 53
53
B
438 444Right-handed alpha
Helix 54
54
B
447 451Right-handed 310
Helix 55
55
B
495 501Right-handed alpha
Helix 56
56
B
531 534Right-handed 310
Helix 57
57
B
612 614Right-handed 310
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There are 14 sheets in PDB entry 3E7J. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 35first strand
Strand 2
A
40 42anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
371 374first strand
Strand 2
A
380 384anti-parallel
Strand 3
A
392 397anti-parallel
Strand 4
A
414 418anti-parallel
Strand 5
A
421 423anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
454 457first strand
Strand 2
A
573 580anti-parallel
Strand 3
A
652 658anti-parallel
Strand 4
A
616 622anti-parallel
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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
508 515first strand
Strand 2
A
523 529anti-parallel
Strand 3
A
538 549anti-parallel
Strand 4
A
557 567anti-parallel
Strand 5
A
664 675anti-parallel
Strand 6
A
602 610anti-parallel
Strand 7
A
590 594anti-parallel
Strand 8
A
585 587anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
629 630first strand
Strand 2
A
633 634anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
685 688first strand
Strand 2
A
692 697anti-parallel
Strand 3
A
700 705anti-parallel
Strand 4
A
725 729parallel
Strand 5
A
759 763anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
715 719first strand
Strand 2
A
766 771anti-parallel
Strand 3
A
735 741anti-parallel
Strand 4
A
744 752anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
33 35first strand
Strand 2
B
40 42anti-parallel
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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
371 374first strand
Strand 2
B
380 384anti-parallel
Strand 3
B
393 397anti-parallel
Strand 4
B
414 417anti-parallel
Strand 5
B
421 423anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
454 457first strand
Strand 2
B
573 580anti-parallel
Strand 3
B
652 658anti-parallel
Strand 4
B
616 622anti-parallel
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There are 8 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
508 515first strand
Strand 2
B
523 529anti-parallel
Strand 3
B
538 549anti-parallel
Strand 4
B
557 567anti-parallel
Strand 5
B
664 675anti-parallel
Strand 6
B
602 610anti-parallel
Strand 7
B
590 594anti-parallel
Strand 8
B
585 587anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
629 630first strand
Strand 2
B
633 634anti-parallel
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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
685 688first strand
Strand 2
B
692 697anti-parallel
Strand 3
B
700 705anti-parallel
Strand 4
B
725 729parallel
Strand 5
B
759 763anti-parallel
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There are 4 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
715 719first strand
Strand 2
B
766 771anti-parallel
Strand 3
B
735 741anti-parallel
Strand 4
B
744 752anti-parallel
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