Analysis of interatomic Contacts of Structural Units in PDB entry:
3E7P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3E7P entry

There is 1 chain in PDB entry 3E7P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 7PHE 259
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 3E7P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 22Right-handed alpha
Helix 2
2
A
31 40Right-handed alpha
Helix 3
3
A
59 69Right-handed alpha
Helix 4
4
A
79 93Right-handed alpha
Helix 5
5
A
124 128Right-handed 310
Helix 6
6
A
129 138Right-handed alpha
Helix 7
7
A
160 169Right-handed alpha
Helix 8
8
A
177 187Right-handed alpha
Helix 9
9
A
198 202Right-handed 310
Helix 10
10
A
206 221Right-handed alpha
Helix 11
11
A
224 245Right-handed alpha
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There are 2 sheets in PDB entry 3E7P. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
99 103first strand
Strand 2
A
72 77parallel
Strand 3
A
50 54parallel
Strand 4
A
116 122parallel
Strand 5
A
141 154parallel
Strand 6
A
175 176parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
99 103first strand
Strand 2
A
72 77parallel
Strand 3
A
50 54parallel
Strand 4
A
116 122parallel
Strand 5
A
141 154parallel
Strand 6
A
248 257anti-parallel
Strand 7
A
189 196anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il