Analysis of interatomic Contacts of Structural Units in PDB entry:
3E7S


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3E7S entry

There are 3 chains in PDB entry 3E7S (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 60TRP 479
B
 GLY 64VAL 380
B
 MET 382LYS 480
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 36 helices in PDB entry 3E7S. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
82 87Right-handed 310
Helix 2
2
A
120 137Right-handed alpha
Helix 3
3
A
143 149Right-handed alpha
Helix 4
4
A
165 180Right-handed alpha
Helix 5
5
A
185 189Right-handed 310
Helix 6
6
A
202 219Right-handed alpha
Helix 7
7
A
220 222Right-handed 310
Helix 8
8
A
266 276Right-handed alpha
Helix 9
9
A
305 309Right-handed 310
Helix 10
10
A
319 326Right-handed 310
Helix 11
11
A
357 363Right-handed alpha
Helix 12
12
A
363 368Right-handed alpha
Helix 13
13
A
374 382Right-handed alpha
Helix 14
14
A
388 391Right-handed 310
Helix 15
15
A
392 412Right-handed alpha
Helix 16
16
A
418 438Right-handed alpha
Helix 17
17
A
443 448Right-handed alpha
Helix 18
18
A
452 461Right-handed 310
Helix 19
19
B
82 87Right-handed 310
Helix 20
20
B
118 137Right-handed alpha
Helix 21
21
B
142 160Right-handed alpha
Helix 22
22
B
165 180Right-handed alpha
Helix 23
23
B
185 189Right-handed 310
Helix 24
24
B
202 219Right-handed alpha
Helix 25
25
B
220 222Right-handed 310
Helix 26
26
B
266 276Right-handed alpha
Helix 27
27
B
305 309Right-handed 310
Helix 28
28
B
319 326Right-handed 310
Helix 29
29
B
357 363Right-handed alpha
Helix 30
30
B
363 368Right-handed alpha
Helix 31
31
B
374 380Right-handed alpha
Helix 32
32
B
388 391Right-handed 310
Helix 33
33
B
392 413Right-handed alpha
Helix 34
34
B
418 438Right-handed alpha
Helix 35
35
B
443 448Right-handed alpha
Helix 36
36
B
452 456Right-handed 310
Back to top of page

There are 13 sheets in PDB entry 3E7S. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 71first strand
Strand 2
A
78 80anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
97 98first strand
Strand 2
B
465 466anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
193 196first strand
Strand 2
A
226 229parallel
Strand 3
A
352 353anti-parallel
Strand 4
A
334 335anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
241 242first strand
Strand 2
A
290 293anti-parallel
Strand 3
A
300 302anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
252 254first strand
Strand 2
A
260 262anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
311 313first strand
Strand 2
A
328 330anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
345 347first strand
Strand 2
A
339 342anti-parallel
Strand 3
A
471 473anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
69 71first strand
Strand 2
B
78 80anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
193 196first strand
Strand 2
B
226 229parallel
Strand 3
B
352 353anti-parallel
Strand 4
B
334 335anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
241 242first strand
Strand 2
B
290 293anti-parallel
Strand 3
B
300 302anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
252 254first strand
Strand 2
B
260 262anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
311 313first strand
Strand 2
B
328 330anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
345 347first strand
Strand 2
B
339 342anti-parallel
Strand 3
B
471 473anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il