Analysis of interatomic Contacts of Structural Units in PDB entry:
3E90


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3E90 entry

There are 4 chains in PDB entry 3E90 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 51GLY 97
B
 GLY 0ILE 175
C
 GLY 49ASN 89
D
 GLY 1PRO 174
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 2 helices in PDB entry 3E90. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
B
49 53Right-handed 310
Helix 2
2
D
49 53Right-handed 310
Back to top of page

There are 8 sheets in PDB entry 3E90. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
63 65first strand
Strand 2
B
58 60anti-parallel
Strand 3
A
52 58parallel
Strand 4
B
21 29anti-parallel
Strand 5
B
32 42anti-parallel
Strand 6
B
45 48anti-parallel
Strand 7
B
76 79anti-parallel
Strand 8
B
67 71anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
67 68first strand
Strand 2
B
107 111parallel
Strand 3
B
95 99anti-parallel
Strand 4
B
138 140anti-parallel
Strand 5
B
146 149anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 76first strand
Strand 2
B
114 118parallel
Strand 3
B
121 126anti-parallel
Strand 4
B
161 164anti-parallel
Strand 5
B
153 155anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 79first strand
Strand 2
A
85 86anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
52 58first strand
Strand 2
D
21 27anti-parallel
Strand 3
D
34 42anti-parallel
Strand 4
D
45 48anti-parallel
Strand 5
D
76 79anti-parallel
Strand 6
D
67 71anti-parallel
Strand 7
D
3 4anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
85 87first strand
Strand 2
C
74 79anti-parallel
Strand 3
D
114 118parallel
Strand 4
D
121 126anti-parallel
Strand 5
D
161 164anti-parallel
Strand 6
D
153 155anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
58 60first strand
Strand 2
D
63 65anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
107 111first strand
Strand 2
D
95 99anti-parallel
Strand 3
D
138 140anti-parallel
Strand 4
D
146 149anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il