Analysis of interatomic Contacts of Structural Units in PDB entry:
3E96


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3E96 entry

There are 2 chains in PDB entry 3E96 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 7LEU 302
B
 LEU 8LYS 307
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 3E96. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
7 12Right-handed alpha
Helix 2
2
A
31 44Right-handed alpha
Helix 3
3
A
54 62Right-handed 310
Helix 4
4
A
63 79Right-handed alpha
Helix 5
5
A
91 106Right-handed alpha
Helix 6
6
A
121 137Right-handed alpha
Helix 7
7
A
151 158Right-handed alpha
Helix 8
8
A
172 181Right-handed alpha
Helix 9
9
A
182 183Right-handed 310
Helix 10
10
A
184 188Right-handed 310
Helix 11
11
A
199 207Right-handed alpha
Helix 12
12
A
214 218Right-handed 310
Helix 13
13
A
219 232Right-handed alpha
Helix 14
14
A
234 253Right-handed alpha
Helix 15
15
A
261 271Right-handed alpha
Helix 16
16
A
286 300Right-handed alpha
Helix 17
17
B
31 44Right-handed alpha
Helix 18
18
B
58 62Right-handed 310
Helix 19
19
B
63 79Right-handed alpha
Helix 20
20
B
91 106Right-handed alpha
Helix 21
21
B
121 137Right-handed alpha
Helix 22
22
B
151 158Right-handed alpha
Helix 23
23
B
172 181Right-handed alpha
Helix 24
24
B
182 183Right-handed 310
Helix 25
25
B
184 188Right-handed 310
Helix 26
26
B
199 207Right-handed alpha
Helix 27
27
B
214 218Right-handed 310
Helix 28
28
B
219 232Right-handed alpha
Helix 29
29
B
234 253Right-handed alpha
Helix 30
30
B
261 271Right-handed alpha
Helix 31
31
B
286 300Right-handed alpha
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There are 2 sheets in PDB entry 3E96. Click on sheet of interest to get list of strands forming it: A, B,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 17first strand
Strand 2
A
49 50parallel
Strand 3
A
83 88parallel
Strand 4
A
109 112parallel
Strand 5
A
140 144parallel
Strand 6
A
163 168parallel
Strand 7
A
190 193parallel
Strand 8
A
210 213parallel
Strand 9
A
15 17parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
15 17first strand
Strand 2
B
49 50parallel
Strand 3
B
83 88parallel
Strand 4
B
109 112parallel
Strand 5
B
140 144parallel
Strand 6
B
163 168parallel
Strand 7
B
190 193parallel
Strand 8
B
210 213parallel
Strand 9
B
15 17parallel
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