Analysis of interatomic Contacts of Structural Units in PDB entry:
3EAD


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3EAD entry

There are 4 chains in PDB entry 3EAD (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 442ASP 552
B
 PRO 441ALA 554
C
 ILE 442HIS 553
D
 ILE 442ASP 552
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 3EAD

There are 8 sheets in PDB entry 3EAD. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
506 512first strand
Strand 2
A
459 467anti-parallel
Strand 3
A
443 446anti-parallel
Strand 4
A
537 538parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
450 454first strand
Strand 2
A
543 549parallel
Strand 3
A
523 530anti-parallel
Strand 4
A
474 481anti-parallel
Strand 5
A
495 500anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
506 512first strand
Strand 2
B
459 467anti-parallel
Strand 3
B
443 446anti-parallel
Strand 4
B
537 538parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
450 454first strand
Strand 2
B
543 549parallel
Strand 3
B
523 530anti-parallel
Strand 4
B
474 481anti-parallel
Strand 5
B
495 500anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
506 512first strand
Strand 2
C
459 467anti-parallel
Strand 3
C
443 446anti-parallel
Strand 4
C
537 538parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
450 454first strand
Strand 2
C
543 549parallel
Strand 3
C
523 530anti-parallel
Strand 4
C
474 482anti-parallel
Strand 5
C
495 500anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
506 512first strand
Strand 2
D
459 467anti-parallel
Strand 3
D
443 446anti-parallel
Strand 4
D
537 538parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
450 454first strand
Strand 2
D
543 549parallel
Strand 3
D
523 530anti-parallel
Strand 4
D
474 481anti-parallel
Strand 5
D
495 500anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il