Analysis of interatomic Contacts of Structural Units in PDB entry:
3EB2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3EB2 entry

There are 4 chains in PDB entry 3EB2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 4ILE 291
B
 LEU 3GLU 293
C
 ASP 4ILE 291
D
 ASP 4GLU 293
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 57 helices in PDB entry 3EB2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
23 37Right-handed alpha
Helix 2
2
A
46 54Right-handed 310
Helix 3
3
A
55 71Right-handed alpha
Helix 4
4
A
84 99Right-handed alpha
Helix 5
5
A
114 129Right-handed alpha
Helix 6
6
A
147 156Right-handed alpha
Helix 7
7
A
169 181Right-handed alpha
Helix 8
8
A
182 184Right-handed 310
Helix 9
9
A
193 200Right-handed alpha
Helix 10
10
A
208 212Right-handed 310
Helix 11
11
A
213 226Right-handed alpha
Helix 12
12
A
228 240Right-handed alpha
Helix 13
13
A
240 247Right-handed alpha
Helix 14
14
A
250 262Right-handed alpha
Helix 15
15
A
277 291Right-handed alpha
Helix 16
16
B
23 37Right-handed alpha
Helix 17
17
B
46 54Right-handed 310
Helix 18
18
B
55 71Right-handed alpha
Helix 19
19
B
84 99Right-handed alpha
Helix 20
20
B
114 129Right-handed alpha
Helix 21
21
B
147 156Right-handed alpha
Helix 22
22
B
169 181Right-handed alpha
Helix 23
23
B
182 184Right-handed 310
Helix 24
24
B
193 201Right-handed alpha
Helix 25
25
B
208 212Right-handed 310
Helix 26
26
B
213 226Right-handed alpha
Helix 27
27
B
228 247Right-handed alpha
Helix 28
28
B
250 262Right-handed alpha
Helix 29
29
B
277 292Right-handed alpha
Helix 30
30
C
23 38Right-handed alpha
Helix 31
31
C
46 54Right-handed 310
Helix 32
32
C
55 71Right-handed alpha
Helix 33
33
C
84 99Right-handed alpha
Helix 34
34
C
114 129Right-handed alpha
Helix 35
35
C
147 156Right-handed alpha
Helix 36
36
C
169 181Right-handed alpha
Helix 37
37
C
182 184Right-handed 310
Helix 38
38
C
193 200Right-handed alpha
Helix 39
39
C
208 212Right-handed 310
Helix 40
40
C
213 226Right-handed alpha
Helix 41
41
C
228 247Right-handed alpha
Helix 42
42
C
250 262Right-handed alpha
Helix 43
43
C
277 291Right-handed alpha
Helix 44
44
D
23 37Right-handed alpha
Helix 45
45
D
46 54Right-handed 310
Helix 46
46
D
55 71Right-handed alpha
Helix 47
47
D
84 99Right-handed alpha
Helix 48
48
D
114 127Right-handed alpha
Helix 49
49
D
147 155Right-handed alpha
Helix 50
50
D
169 181Right-handed alpha
Helix 51
51
D
182 184Right-handed 310
Helix 52
52
D
193 200Right-handed alpha
Helix 53
53
D
208 212Right-handed 310
Helix 54
54
D
213 226Right-handed alpha
Helix 55
55
D
228 247Right-handed alpha
Helix 56
56
D
250 262Right-handed alpha
Helix 57
57
D
277 292Right-handed alpha
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There are 4 sheets in PDB entry 3EB2. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 10first strand
Strand 2
A
204 207parallel
Strand 3
A
185 188parallel
Strand 4
A
160 165parallel
Strand 5
A
133 137parallel
Strand 6
A
102 107parallel
Strand 7
A
77 82parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
7 10first strand
Strand 2
B
204 207parallel
Strand 3
B
185 188parallel
Strand 4
B
160 165parallel
Strand 5
B
133 137parallel
Strand 6
B
102 107parallel
Strand 7
B
77 82parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
7 10first strand
Strand 2
C
204 207parallel
Strand 3
C
185 188parallel
Strand 4
C
160 165parallel
Strand 5
C
133 137parallel
Strand 6
C
102 107parallel
Strand 7
C
77 82parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
7 10first strand
Strand 2
D
204 207parallel
Strand 3
D
185 188parallel
Strand 4
D
160 165parallel
Strand 5
D
133 137parallel
Strand 6
D
102 107parallel
Strand 7
D
77 82parallel
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