Analysis of interatomic Contacts of Structural Units in PDB entry:
3EBB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3EBB entry

There are 8 chains in PDB entry 3EBB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 531LEU 795
B
 MSE 531LEU 795
C
 THR 530LEU 795
D
 ASN 532LEU 795
E
 LEU 804TYR 805
F
 ASP 803GLY 806
G
 LEU 804GLY 806
H
 ASP 803TYR 805
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 71 helices in PDB entry 3EBB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
547 560Right-handed alpha
Helix 2
2
A
561 562Right-handed 310
Helix 3
3
A
563 567Right-handed 310
Helix 4
4
A
569 585Right-handed alpha
Helix 5
5
A
592 604Right-handed alpha
Helix 6
6
A
610 621Right-handed alpha
Helix 7
7
A
623 632Right-handed alpha
Helix 8
8
A
635 646Right-handed alpha
Helix 9
9
A
652 666Right-handed alpha
Helix 10
10
A
669 679Right-handed alpha
Helix 11
11
A
679 689Right-handed alpha
Helix 12
12
A
690 692Right-handed 310
Helix 13
13
A
695 716Right-handed alpha
Helix 14
14
A
718 734Right-handed alpha
Helix 15
15
A
738 754Right-handed alpha
Helix 16
16
A
756 766Right-handed alpha
Helix 17
17
A
767 772Right-handed alpha
Helix 18
18
A
773 778Right-handed 310
Helix 19
19
A
781 793Right-handed alpha
Helix 20
20
B
547 560Right-handed alpha
Helix 21
21
B
569 585Right-handed alpha
Helix 22
22
B
592 604Right-handed alpha
Helix 23
23
B
605 609Right-handed 310
Helix 24
24
B
610 621Right-handed alpha
Helix 25
25
B
623 632Right-handed alpha
Helix 26
26
B
635 646Right-handed alpha
Helix 27
27
B
652 667Right-handed alpha
Helix 28
28
B
669 679Right-handed alpha
Helix 29
29
B
679 690Right-handed alpha
Helix 30
30
B
695 716Right-handed alpha
Helix 31
31
B
721 734Right-handed alpha
Helix 32
32
B
738 754Right-handed alpha
Helix 33
33
B
756 767Right-handed alpha
Helix 34
34
B
767 773Right-handed alpha
Helix 35
35
B
774 777Right-handed 310
Helix 36
36
B
781 795Right-handed alpha
Helix 37
37
C
547 560Right-handed alpha
Helix 38
38
C
569 585Right-handed alpha
Helix 39
39
C
592 603Right-handed alpha
Helix 40
40
C
604 605Right-handed 310
Helix 41
41
C
606 609Right-handed 310
Helix 42
42
C
610 621Right-handed alpha
Helix 43
43
C
623 632Right-handed alpha
Helix 44
44
C
635 648Right-handed alpha
Helix 45
45
C
652 667Right-handed alpha
Helix 46
46
C
669 679Right-handed alpha
Helix 47
47
C
679 688Right-handed alpha
Helix 48
48
C
689 692Right-handed 310
Helix 49
49
C
695 717Right-handed alpha
Helix 50
50
C
718 734Right-handed alpha
Helix 51
51
C
738 754Right-handed alpha
Helix 52
52
C
756 766Right-handed alpha
Helix 53
53
C
767 773Right-handed alpha
Helix 54
54
C
774 778Right-handed 310
Helix 55
55
C
781 795Right-handed alpha
Helix 56
56
D
547 560Right-handed alpha
Helix 57
57
D
569 586Right-handed alpha
Helix 58
58
D
592 603Right-handed alpha
Helix 59
59
D
610 621Right-handed alpha
Helix 60
60
D
623 632Right-handed alpha
Helix 61
61
D
635 646Right-handed alpha
Helix 62
62
D
652 667Right-handed alpha
Helix 63
63
D
669 679Right-handed alpha
Helix 64
64
D
679 690Right-handed alpha
Helix 65
65
D
695 716Right-handed alpha
Helix 66
66
D
721 736Right-handed alpha
Helix 67
67
D
738 754Right-handed alpha
Helix 68
68
D
756 767Right-handed alpha
Helix 69
69
D
767 773Right-handed alpha
Helix 70
70
D
774 778Right-handed 310
Helix 71
71
D
781 795Right-handed alpha
Back to top of page
There are no sheets in PDB entry 3EBB
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il