Analysis of interatomic Contacts of Structural Units in PDB entry:
3EBN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3EBN entry

There are 4 chains in PDB entry 3EBN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 198VAL 297
B
 THR 198VAL 297
C
 THR 198ARG 298
D
 THR 198ARG 298
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 3EBN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
200 214Right-handed alpha
Helix 2
2
A
226 237Right-handed alpha
Helix 3
3
A
243 250Right-handed alpha
Helix 4
4
A
250 258Right-handed alpha
Helix 5
5
A
260 275Right-handed alpha
Helix 6
6
A
292 297Right-handed alpha
Helix 7
7
B
200 214Right-handed alpha
Helix 8
8
B
217 221Right-handed 310
Helix 9
9
B
226 237Right-handed alpha
Helix 10
10
B
243 250Right-handed alpha
Helix 11
11
B
250 258Right-handed alpha
Helix 12
12
B
260 275Right-handed alpha
Helix 13
13
B
292 297Right-handed alpha
Helix 14
14
C
200 214Right-handed alpha
Helix 15
15
C
217 221Right-handed 310
Helix 16
16
C
226 237Right-handed alpha
Helix 17
17
C
243 250Right-handed alpha
Helix 18
18
C
250 258Right-handed alpha
Helix 19
19
C
260 275Right-handed alpha
Helix 20
20
C
292 298Right-handed alpha
Helix 21
21
D
200 214Right-handed alpha
Helix 22
22
D
217 221Right-handed 310
Helix 23
23
D
226 237Right-handed alpha
Helix 24
24
D
243 250Right-handed alpha
Helix 25
25
D
250 258Right-handed alpha
Helix 26
26
D
260 275Right-handed alpha
Helix 27
27
D
292 298Right-handed alpha
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There are no sheets in PDB entry 3EBN
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il