Analysis of interatomic Contacts of Structural Units in PDB entry:
3ED5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ED5 entry

There is 1 chain in PDB entry 3ED5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1THR 232
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 3ED5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 33Right-handed alpha
Helix 2
2
A
38 58Right-handed alpha
Helix 3
3
A
62 78Right-handed alpha
Helix 4
4
A
83 96Right-handed alpha
Helix 5
5
A
104 114Right-handed alpha
Helix 6
6
A
125 136Right-handed alpha
Helix 7
7
A
138 142Right-handed 310
Helix 8
8
A
149 151Right-handed 310
Helix 9
9
A
157 167Right-handed alpha
Helix 10
10
A
172 174Right-handed 310
Helix 11
11
A
186 193Right-handed alpha
Helix 12
12
A
219 221Right-handed 310
Helix 13
13
A
222 228Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3ED5.

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
144 147first strand
Strand 2
A
117 122parallel
Strand 3
A
6 9parallel
Strand 4
A
176 180parallel
Strand 5
A
196 200parallel
Strand 6
A
215 217parallel
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