Analysis of interatomic Contacts of Structural Units in PDB entry:
3EDV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3EDV entry

There are 2 chains in PDB entry 3EDV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER -3LEU 2015
B
 SER -3ARG 2014
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 3EDV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
-3 1722Right-handed alpha
Helix 2
2
A
1729 1768Right-handed alpha
Helix 3
3
A
1772 1827Right-handed alpha
Helix 4
4
A
1835 1853Right-handed alpha
Helix 5
5
A
1853 1874Right-handed alpha
Helix 6
6
A
1876 1936Right-handed alpha
Helix 7
7
A
1942 1963Right-handed alpha
Helix 8
8
A
1963 1980Right-handed alpha
Helix 9
9
A
1984 2015Right-handed alpha
Helix 10
10
B
-3 1722Right-handed alpha
Helix 11
11
B
1729 1768Right-handed alpha
Helix 12
12
B
1772 1827Right-handed alpha
Helix 13
13
B
1835 1874Right-handed alpha
Helix 14
14
B
1875 1936Right-handed alpha
Helix 15
15
B
1942 1962Right-handed alpha
Helix 16
16
B
1963 1980Right-handed alpha
Helix 17
17
B
1984 2014Right-handed alpha
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There are no sheets in PDB entry 3EDV
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il