Analysis of interatomic Contacts of Structural Units in PDB entry:
3EET


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3EET entry

There are 2 chains in PDB entry 3EET (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR -4LYS 250
B
 TYR -4LYS 250
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 3EET. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
7 23Right-handed alpha
Helix 2
2
A
33 42Right-handed alpha
Helix 3
3
A
44 58Right-handed alpha
Helix 4
4
A
92 98Right-handed alpha
Helix 5
5
A
117 125Right-handed alpha
Helix 6
6
A
155 159Right-handed alpha
Helix 7
7
A
175 182Right-handed alpha
Helix 8
8
A
200 208Right-handed alpha
Helix 9
9
B
9 23Right-handed alpha
Helix 10
10
B
33 42Right-handed alpha
Helix 11
11
B
44 58Right-handed alpha
Helix 12
12
B
92 98Right-handed alpha
Helix 13
13
B
117 124Right-handed alpha
Helix 14
14
B
155 159Right-handed alpha
Helix 15
15
B
175 183Right-handed alpha
Helix 16
16
B
200 208Right-handed alpha
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There are 5 sheets in PDB entry 3EET. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 63first strand
Strand 2
A
69 71anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 81first strand
Strand 2
A
241 244parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
105 115first strand
Strand 2
A
131 141anti-parallel
Strand 3
A
144 154anti-parallel
Strand 4
A
227 237anti-parallel
Strand 5
A
214 224anti-parallel
Strand 6
A
189 198anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
78 81first strand
Strand 2
B
241 244parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
105 115first strand
Strand 2
B
131 141anti-parallel
Strand 3
B
144 154anti-parallel
Strand 4
B
227 237anti-parallel
Strand 5
B
214 224anti-parallel
Strand 6
B
189 198anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il