Analysis of interatomic Contacts of Structural Units in PDB entry:
3EEV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3EEV entry

There are 3 chains in PDB entry 3EEV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 2ARG 208
B
 MET 1SER 205
C
 MET 1ARG 208
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 3EEV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 16Right-handed 310
Helix 2
2
A
32 36Right-handed 310
Helix 3
3
A
38 41Right-handed 310
Helix 4
4
A
87 91Right-handed 310
Helix 5
5
A
93 97Right-handed 310
Helix 6
6
A
164 175Right-handed alpha
Helix 7
7
A
176 179Right-handed 310
Helix 8
8
A
180 187Right-handed alpha
Helix 9
9
A
187 192Right-handed alpha
Helix 10
10
A
195 208Right-handed alpha
Helix 11
11
B
14 16Right-handed 310
Helix 12
12
B
32 36Right-handed 310
Helix 13
13
B
38 41Right-handed 310
Helix 14
14
B
87 91Right-handed 310
Helix 15
15
B
93 97Right-handed 310
Helix 16
16
B
164 175Right-handed alpha
Helix 17
17
B
176 179Right-handed 310
Helix 18
18
B
180 192Right-handed alpha
Helix 19
19
B
195 205Right-handed alpha
Helix 20
20
C
14 16Right-handed 310
Helix 21
21
C
32 36Right-handed 310
Helix 22
22
C
38 41Right-handed 310
Helix 23
23
C
87 91Right-handed 310
Helix 24
24
C
93 97Right-handed 310
Helix 25
25
C
164 175Right-handed alpha
Helix 26
26
C
176 179Right-handed 310
Helix 27
27
C
180 187Right-handed alpha
Helix 28
28
C
187 192Right-handed alpha
Helix 29
29
C
195 208Right-handed alpha
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There are 9 sheets in PDB entry 3EEV. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 12first strand
Strand 2
A
29 30anti-parallel
Strand 3
A
63 64parallel
Strand 4
A
116 117parallel
Strand 5
A
134 135parallel
Strand 6
A
149 152parallel
Strand 7
A
157 161anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 24first strand
Strand 2
A
56 58parallel
Strand 3
A
109 111parallel
Strand 4
A
128 129parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 44first strand
Strand 2
A
69 71parallel
Strand 3
A
122 123parallel
Strand 4
A
140 141parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
11 12first strand
Strand 2
B
29 31anti-parallel
Strand 3
B
63 65parallel
Strand 4
B
116 117parallel
Strand 5
B
134 135parallel
Strand 6
B
149 152parallel
Strand 7
B
157 161anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
22 24first strand
Strand 2
B
56 58parallel
Strand 3
B
109 111parallel
Strand 4
B
128 129parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
43 44first strand
Strand 2
B
69 71parallel
Strand 3
B
122 123parallel
Strand 4
B
140 141parallel
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There are 7 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
11 12first strand
Strand 2
C
29 30anti-parallel
Strand 3
C
63 64parallel
Strand 4
C
116 117parallel
Strand 5
C
134 135parallel
Strand 6
C
149 152parallel
Strand 7
C
157 161anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
22 24first strand
Strand 2
C
56 58parallel
Strand 3
C
109 111parallel
Strand 4
C
128 129parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
43 44first strand
Strand 2
C
69 71parallel
Strand 3
C
122 123parallel
Strand 4
C
140 141parallel
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