Analysis of interatomic Contacts of Structural Units in PDB entry:
3EG4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3EG4 entry

There is 1 chain in PDB entry 3EG4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 6ASP 284
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 3EG4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 19Right-handed alpha
Helix 2
2
A
20 23Right-handed 310
Helix 3
3
A
28 44Right-handed alpha
Helix 4
4
A
61 75Right-handed alpha
Helix 5
5
A
83 86Right-handed 310
Helix 6
6
A
101 109Right-handed alpha
Helix 7
7
A
269 276Right-handed alpha
Helix 8
8
A
277 284Right-handed alpha
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There are 5 sheets in PDB entry 3EG4. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 52first strand
Strand 2
A
58 60anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 81first strand
Strand 2
A
88 91anti-parallel
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There are 10 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 112first strand
Strand 2
A
129 130parallel
Strand 3
A
146 147parallel
Strand 4
A
164 165parallel
Strand 5
A
190 191parallel
Strand 6
A
208 209parallel
Strand 7
A
238 246parallel
Strand 8
A
258 267anti-parallel
Strand 9
A
221 223parallel
Strand 10
A
229 230anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
117 118first strand
Strand 2
A
133 135parallel
Strand 3
A
151 153parallel
Strand 4
A
170 171parallel
Strand 5
A
196 197parallel
Strand 6
A
214 215parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
123 124first strand
Strand 2
A
140 141parallel
Strand 3
A
158 159parallel
Strand 4
A
184 185parallel
Strand 5
A
202 203parallel
Strand 6
A
233 234parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il