Analysis of interatomic Contacts of Structural Units in PDB entry:
3EGL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3EGL entry

There are 27 chains in PDB entry 3EGL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 0SER 69
A
 GLU 71ALA 114
A
 ASP 116LEU 131
A
 ARG 133TRP 147
A
 SER 149ALA 180
A
 THR 182SER 186
A
 ALA 188ALA 190
A
 LEU 192ALA 218
A
 GLN 220ALA 263
B
 SER -2SER 69
B
 GLU 71ALA 114
B
 ASP 116LEU 131
B
 ARG 133TRP 147
B
 SER 149ALA 180
B
 THR 182SER 186
B
 ALA 188ALA 190
B
 LEU 192ALA 218
B
 GLN 220PRO 264
C
 ALA 0SER 69
C
 GLU 71ALA 114
C
 ASP 116LEU 131
C
 ARG 133TRP 147
C
 SER 149ALA 180
C
 THR 182SER 186
C
 ALA 188ALA 190
C
 LEU 192ALA 218
C
 GLN 220PRO 264
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 33 helices in PDB entry 3EGL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 12Right-handed 310
Helix 2
2
A
14 21Right-handed alpha
Helix 3
3
A
43 58Right-handed alpha
Helix 4
4
A
74 84Right-handed alpha
Helix 5
5
A
100 116Right-handed alpha
Helix 6
6
A
119 133Right-handed alpha
Helix 7
7
A
143 149Right-handed alpha
Helix 8
8
A
159 164Right-handed 310
Helix 9
9
A
184 201Right-handed alpha
Helix 10
10
A
214 229Right-handed alpha
Helix 11
11
A
241 249Right-handed alpha
Helix 12
12
B
10 12Right-handed 310
Helix 13
13
B
14 21Right-handed alpha
Helix 14
14
B
43 58Right-handed alpha
Helix 15
15
B
74 84Right-handed alpha
Helix 16
16
B
100 116Right-handed alpha
Helix 17
17
B
119 133Right-handed alpha
Helix 18
18
B
143 149Right-handed alpha
Helix 19
19
B
153 162Right-handed alpha
Helix 20
20
B
184 201Right-handed alpha
Helix 21
21
B
214 229Right-handed alpha
Helix 22
22
B
241 249Right-handed alpha
Helix 23
23
C
10 12Right-handed 310
Helix 24
24
C
14 21Right-handed alpha
Helix 25
25
C
43 58Right-handed alpha
Helix 26
26
C
74 84Right-handed alpha
Helix 27
27
C
100 116Right-handed alpha
Helix 28
28
C
119 133Right-handed alpha
Helix 29
29
C
143 149Right-handed alpha
Helix 30
30
C
153 160Right-handed alpha
Helix 31
31
C
184 201Right-handed alpha
Helix 32
32
C
214 229Right-handed alpha
Helix 33
33
C
241 247Right-handed alpha
Back to top of page

There are 9 sheets in PDB entry 3EGL. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 26first strand
Strand 2
A
4 8parallel
Strand 3
A
63 66parallel
Strand 4
A
91 94parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 32first strand
Strand 2
A
37 40anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
175 180first strand
Strand 2
A
168 172anti-parallel
Strand 3
A
134 139anti-parallel
Strand 4
A
252 258anti-parallel
Strand 5
A
206 212anti-parallel
Strand 6
A
234 239parallel
Back to list of sheets
Back to top of page

There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
24 26first strand
Strand 2
B
4 8parallel
Strand 3
B
63 66parallel
Strand 4
B
91 94parallel
Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
29 33first strand
Strand 2
B
36 40anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
175 180first strand
Strand 2
B
168 172anti-parallel
Strand 3
B
134 139anti-parallel
Strand 4
B
252 259anti-parallel
Strand 5
B
205 212anti-parallel
Strand 6
B
234 239parallel
Back to list of sheets
Back to top of page

There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
24 26first strand
Strand 2
C
4 8parallel
Strand 3
C
63 67parallel
Strand 4
C
91 95parallel
Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
29 31first strand
Strand 2
C
38 40anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
175 180first strand
Strand 2
C
168 172anti-parallel
Strand 3
C
134 139anti-parallel
Strand 4
C
253 258anti-parallel
Strand 5
C
206 211anti-parallel
Strand 6
C
234 239parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il