Analysis of interatomic Contacts of Structural Units in PDB entry:
3EGO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3EGO entry

There are 2 chains in PDB entry 3EGO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 0GLU 291
B
 LEU 1GLU 291
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 3EGO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 21Right-handed alpha
Helix 2
2
A
31 42Right-handed alpha
Helix 3
3
A
74 76Right-handed 310
Helix 4
4
A
77 85Right-handed alpha
Helix 5
5
A
100 108Right-handed alpha
Helix 6
6
A
149 154Right-handed 310
Helix 7
7
A
171 194Right-handed alpha
Helix 8
8
A
198 203Right-handed alpha
Helix 9
9
A
203 222Right-handed alpha
Helix 10
10
A
225 240Right-handed alpha
Helix 11
11
A
245 254Right-handed alpha
Helix 12
12
A
258 273Right-handed alpha
Helix 13
13
A
277 290Right-handed alpha
Helix 14
14
B
9 20Right-handed alpha
Helix 15
15
B
31 42Right-handed alpha
Helix 16
16
B
74 76Right-handed 310
Helix 17
17
B
77 87Right-handed alpha
Helix 18
18
B
100 108Right-handed alpha
Helix 19
19
B
150 158Right-handed alpha
Helix 20
20
B
171 194Right-handed alpha
Helix 21
21
B
198 203Right-handed alpha
Helix 22
22
B
203 222Right-handed alpha
Helix 23
23
B
225 240Right-handed alpha
Helix 24
24
B
245 252Right-handed alpha
Helix 25
25
B
258 273Right-handed alpha
Helix 26
26
B
277 291Right-handed alpha
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There are 4 sheets in PDB entry 3EGO. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 59first strand
Strand 2
A
24 28parallel
Strand 3
A
2 6parallel
Strand 4
A
68 71parallel
Strand 5
A
92 95parallel
Strand 6
A
114 120parallel
Strand 7
A
140 144anti-parallel
Strand 8
A
166 168parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 54first strand
Strand 2
A
43 47anti-parallel
Strand 3
A
131 136parallel
Strand 4
A
123 126anti-parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
57 59first strand
Strand 2
B
24 28parallel
Strand 3
B
2 6parallel
Strand 4
B
68 71parallel
Strand 5
B
92 95parallel
Strand 6
B
114 120parallel
Strand 7
B
140 144anti-parallel
Strand 8
B
166 168parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
50 54first strand
Strand 2
B
43 47anti-parallel
Strand 3
B
131 136parallel
Strand 4
B
123 126anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il