Analysis of interatomic Contacts of Structural Units in PDB entry:
3EIE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3EIE entry

There is 1 chain in PDB entry 3EIE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 121GLY 433
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 3EIE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
131 135Right-handed 310
Helix 2
2
A
138 149Right-handed alpha
Helix 3
3
A
149 155Right-handed alpha
Helix 4
4
A
156 159Right-handed 310
Helix 5
5
A
178 191Right-handed alpha
Helix 6
6
A
199 204Right-handed alpha
Helix 7
7
A
206 208Right-handed 310
Helix 8
8
A
209 224Right-handed alpha
Helix 9
9
A
234 238Right-handed 310
Helix 10
10
A
249 261Right-handed alpha
Helix 11
11
A
262 265Right-handed 310
Helix 12
12
A
278 282Right-handed 310
Helix 13
13
A
283 290Right-handed alpha
Helix 14
14
A
300 313Right-handed alpha
Helix 15
15
A
320 330Right-handed alpha
Helix 16
16
A
335 347Right-handed alpha
Helix 17
17
A
348 357Right-handed alpha
Helix 18
18
A
389 391Right-handed 310
Helix 19
19
A
402 413Right-handed alpha
Helix 20
20
A
420 433Right-handed alpha
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There are 2 sheets in PDB entry 3EIE. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 126first strand
Strand 2
A
193 198anti-parallel
Strand 3
A
227 232parallel
Strand 4
A
270 276parallel
Strand 5
A
168 172parallel
Strand 6
A
292 295parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
373 375first strand
Strand 2
A
358 362anti-parallel
Strand 3
A
383 387anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il