Analysis of interatomic Contacts of Structural Units in PDB entry:
3EIH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3EIH entry

There are 3 chains in PDB entry 3EIH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 119ASN 437
B
 SER 120GLU 435
C
 ILE 123ASN 437
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 3EIH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
131 135Right-handed 310
Helix 2
2
A
138 149Right-handed alpha
Helix 3
3
A
149 155Right-handed alpha
Helix 4
4
A
178 189Right-handed alpha
Helix 5
5
A
199 205Right-handed alpha
Helix 6
6
A
206 208Right-handed 310
Helix 7
7
A
209 223Right-handed alpha
Helix 8
8
A
234 237Right-handed 310
Helix 9
9
A
249 265Right-handed alpha
Helix 10
10
A
278 282Right-handed 310
Helix 11
11
A
283 290Right-handed alpha
Helix 12
12
A
300 313Right-handed alpha
Helix 13
13
A
320 331Right-handed alpha
Helix 14
14
A
335 356Right-handed alpha
Helix 15
15
A
387 391Right-handed 310
Helix 16
16
A
392 396Right-handed 310
Helix 17
17
A
402 412Right-handed alpha
Helix 18
18
A
418 432Right-handed alpha
Helix 19
19
B
138 150Right-handed alpha
Helix 20
20
B
150 155Right-handed alpha
Helix 21
21
B
156 159Right-handed 310
Helix 22
22
B
178 189Right-handed alpha
Helix 23
23
B
199 203Right-handed alpha
Helix 24
24
B
213 223Right-handed alpha
Helix 25
25
B
233 238Right-handed 310
Helix 26
26
B
252 260Right-handed alpha
Helix 27
27
B
283 290Right-handed alpha
Helix 28
28
B
300 313Right-handed alpha
Helix 29
29
B
320 330Right-handed alpha
Helix 30
30
B
335 348Right-handed alpha
Helix 31
31
B
348 357Right-handed alpha
Helix 32
32
B
392 396Right-handed 310
Helix 33
33
B
402 413Right-handed alpha
Helix 34
34
B
419 421Right-handed 310
Helix 35
35
B
422 431Right-handed alpha
Helix 36
36
C
139 150Right-handed alpha
Helix 37
37
C
150 155Right-handed alpha
Helix 38
38
C
183 188Right-handed alpha
Helix 39
39
C
211 224Right-handed alpha
Helix 40
40
C
248 258Right-handed alpha
Helix 41
41
C
259 263Right-handed 310
Helix 42
42
C
278 282Right-handed 310
Helix 43
43
C
283 290Right-handed alpha
Helix 44
44
C
300 313Right-handed alpha
Helix 45
45
C
320 331Right-handed alpha
Helix 46
46
C
335 347Right-handed alpha
Helix 47
47
C
348 357Right-handed alpha
Helix 48
48
C
392 396Right-handed 310
Helix 49
49
C
402 413Right-handed alpha
Helix 50
50
C
418 433Right-handed alpha
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There are 6 sheets in PDB entry 3EIH. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
193 198first strand
Strand 2
A
227 232parallel
Strand 3
A
270 276parallel
Strand 4
A
168 172parallel
Strand 5
A
292 295parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
373 375first strand
Strand 2
A
359 362anti-parallel
Strand 3
A
384 385anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
124 126first strand
Strand 2
B
193 198anti-parallel
Strand 3
B
227 232parallel
Strand 4
B
270 276parallel
Strand 5
B
168 172parallel
Strand 6
B
292 295parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
359 362first strand
Strand 2
B
373 376anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
230 231first strand
Strand 2
C
272 276parallel
Strand 3
C
168 172parallel
Strand 4
C
292 295parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
373 375first strand
Strand 2
C
359 362anti-parallel
Strand 3
C
384 385anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il