Analysis of interatomic Contacts of Structural Units in PDB entry:
3EIX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3EIX entry

There is 1 chain in PDB entry 3EIX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 36GLU 325
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 3EIX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
61 71Right-handed alpha
Helix 2
2
A
83 87Right-handed 310
Helix 3
3
A
88 96Right-handed alpha
Helix 4
4
A
108 115Right-handed alpha
Helix 5
5
A
130 138Right-handed alpha
Helix 6
6
A
149 164Right-handed alpha
Helix 7
7
A
166 188Right-handed alpha
Helix 8
8
A
213 222Right-handed alpha
Helix 9
9
A
229 235Right-handed alpha
Helix 10
10
A
236 238Right-handed 310
Helix 11
11
A
248 256Right-handed alpha
Helix 12
12
A
265 268Right-handed 310
Helix 13
13
A
271 280Right-handed alpha
Helix 14
14
A
280 286Right-handed alpha
Helix 15
15
A
286 291Right-handed alpha
Helix 16
16
A
299 303Right-handed alpha
Helix 17
17
A
307 324Right-handed alpha
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There are 3 sheets in PDB entry 3EIX. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 43first strand
Strand 2
A
46 51anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
99 100first strand
Strand 2
A
77 78parallel
Strand 3
A
57 59parallel
Strand 4
A
119 123parallel
Strand 5
A
140 143parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
240 241first strand
Strand 2
A
244 247anti-parallel
Strand 3
A
205 208anti-parallel
Strand 4
A
196 202anti-parallel
Strand 5
A
259 264parallel
Strand 6
A
294 298parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il