Analysis of interatomic Contacts of Structural Units in PDB entry:
3EO8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3EO8 entry

There are 6 chains in PDB entry 3EO8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 0LYS 218
B
 GLY 0LYS 218
C
 GLY 0LYS 218
D
 GLY 0LYS 218
E
 GLY 0LYS 218
F
 GLY 0LYS 218
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 75 helices in PDB entry 3EO8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 10Right-handed alpha
Helix 2
2
A
22 35Right-handed alpha
Helix 3
3
A
38 42Right-handed 310
Helix 4
4
A
52 75Right-handed alpha
Helix 5
5
A
78 93Right-handed alpha
Helix 6
6
A
94 99Right-handed 310
Helix 7
7
A
114 121Right-handed alpha
Helix 8
8
A
124 133Right-handed alpha
Helix 9
9
A
135 155Right-handed alpha
Helix 10
10
A
165 167Right-handed 310
Helix 11
11
A
168 181Right-handed alpha
Helix 12
12
A
209 212Right-handed 310
Helix 13
13
B
2 10Right-handed alpha
Helix 14
14
B
22 35Right-handed alpha
Helix 15
15
B
38 42Right-handed 310
Helix 16
16
B
52 75Right-handed alpha
Helix 17
17
B
78 93Right-handed alpha
Helix 18
18
B
94 99Right-handed 310
Helix 19
19
B
114 121Right-handed alpha
Helix 20
20
B
124 130Right-handed alpha
Helix 21
21
B
131 134Right-handed 310
Helix 22
22
B
135 155Right-handed alpha
Helix 23
23
B
165 167Right-handed 310
Helix 24
24
B
168 181Right-handed alpha
Helix 25
25
B
209 212Right-handed 310
Helix 26
26
C
2 10Right-handed alpha
Helix 27
27
C
22 34Right-handed alpha
Helix 28
28
C
38 42Right-handed 310
Helix 29
29
C
52 75Right-handed alpha
Helix 30
30
C
78 93Right-handed alpha
Helix 31
31
C
94 99Right-handed 310
Helix 32
32
C
114 121Right-handed alpha
Helix 33
33
C
124 133Right-handed alpha
Helix 34
34
C
135 155Right-handed alpha
Helix 35
35
C
163 167Right-handed 310
Helix 36
36
C
168 181Right-handed alpha
Helix 37
37
C
209 212Right-handed 310
Helix 38
38
D
2 10Right-handed alpha
Helix 39
39
D
22 35Right-handed alpha
Helix 40
40
D
38 42Right-handed 310
Helix 41
41
D
52 75Right-handed alpha
Helix 42
42
D
78 93Right-handed alpha
Helix 43
43
D
94 99Right-handed 310
Helix 44
44
D
114 121Right-handed alpha
Helix 45
45
D
124 134Right-handed alpha
Helix 46
46
D
135 155Right-handed alpha
Helix 47
47
D
163 167Right-handed 310
Helix 48
48
D
168 181Right-handed alpha
Helix 49
49
D
209 212Right-handed 310
Helix 50
50
E
2 10Right-handed alpha
Helix 51
51
E
22 35Right-handed alpha
Helix 52
52
E
38 42Right-handed 310
Helix 53
53
E
52 75Right-handed alpha
Helix 54
54
E
78 93Right-handed alpha
Helix 55
55
E
94 99Right-handed 310
Helix 56
56
E
114 121Right-handed alpha
Helix 57
57
E
124 130Right-handed alpha
Helix 58
58
E
131 134Right-handed 310
Helix 59
59
E
135 155Right-handed alpha
Helix 60
60
E
163 167Right-handed 310
Helix 61
61
E
168 181Right-handed alpha
Helix 62
62
E
209 212Right-handed 310
Helix 63
63
F
2 10Right-handed alpha
Helix 64
64
F
22 35Right-handed alpha
Helix 65
65
F
38 42Right-handed 310
Helix 66
66
F
52 75Right-handed alpha
Helix 67
67
F
78 93Right-handed alpha
Helix 68
68
F
94 99Right-handed 310
Helix 69
69
F
114 121Right-handed alpha
Helix 70
70
F
124 130Right-handed alpha
Helix 71
71
F
131 134Right-handed 310
Helix 72
72
F
135 155Right-handed alpha
Helix 73
73
F
163 167Right-handed 310
Helix 74
74
F
168 181Right-handed alpha
Helix 75
75
F
209 212Right-handed 310
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There are 6 sheets in PDB entry 3EO8. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
158 162first strand
Strand 2
A
188 196anti-parallel
Strand 3
A
101 107anti-parallel
Strand 4
A
46 50anti-parallel
Strand 5
B
214 216parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
214 217first strand
Strand 2
B
46 50parallel
Strand 3
B
101 107anti-parallel
Strand 4
B
188 196anti-parallel
Strand 5
B
158 162anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
158 162first strand
Strand 2
C
188 196anti-parallel
Strand 3
C
101 107anti-parallel
Strand 4
C
46 50anti-parallel
Strand 5
D
214 217parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
214 217first strand
Strand 2
D
46 50parallel
Strand 3
D
101 107anti-parallel
Strand 4
D
188 196anti-parallel
Strand 5
D
158 162anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
158 162first strand
Strand 2
E
188 196anti-parallel
Strand 3
E
101 107anti-parallel
Strand 4
E
46 50anti-parallel
Strand 5
F
214 216parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
214 216first strand
Strand 2
F
46 50parallel
Strand 3
F
101 107anti-parallel
Strand 4
F
188 196anti-parallel
Strand 5
F
158 162anti-parallel
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