Analysis of interatomic Contacts of Structural Units in PDB entry:
3EOL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3EOL entry

There are 2 chains in PDB entry 3EOL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 3GLY 407
B
 ASP 3THR 406
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 3EOL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
24 33Right-handed alpha
Helix 2
2
A
39 56Right-handed alpha
Helix 3
3
A
66 76Right-handed alpha
Helix 4
4
A
108 131Right-handed alpha
Helix 5
5
A
154 169Right-handed alpha
Helix 6
6
A
195 214Right-handed alpha
Helix 7
7
A
239 243Right-handed 310
Helix 8
8
A
260 272Right-handed alpha
Helix 9
9
A
273 275Right-handed 310
Helix 10
10
A
286 301Right-handed alpha
Helix 11
11
A
315 320Right-handed alpha
Helix 12
12
A
321 335Right-handed alpha
Helix 13
13
A
344 365Right-handed alpha
Helix 14
14
A
365 380Right-handed alpha
Helix 15
15
A
381 383Right-handed 310
Helix 16
16
A
396 406Right-handed alpha
Helix 17
17
B
24 31Right-handed alpha
Helix 18
18
B
39 56Right-handed alpha
Helix 19
19
B
66 76Right-handed alpha
Helix 20
20
B
109 131Right-handed alpha
Helix 21
21
B
154 169Right-handed alpha
Helix 22
22
B
195 214Right-handed alpha
Helix 23
23
B
239 243Right-handed 310
Helix 24
24
B
244 248Right-handed 310
Helix 25
25
B
260 272Right-handed alpha
Helix 26
26
B
273 275Right-handed 310
Helix 27
27
B
286 301Right-handed alpha
Helix 28
28
B
315 320Right-handed alpha
Helix 29
29
B
321 335Right-handed alpha
Helix 30
30
B
344 365Right-handed alpha
Helix 31
31
B
365 380Right-handed alpha
Helix 32
32
B
396 406Right-handed alpha
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There are 4 sheets in PDB entry 3EOL. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 62first strand
Strand 2
A
337 342parallel
Strand 3
A
306 309parallel
Strand 4
A
277 280parallel
Strand 5
A
218 223parallel
Strand 6
A
172 176parallel
Strand 7
A
144 147parallel
Strand 8
A
81 83parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
192 193first strand
Strand 2
A
230 231parallel
Strand 3
A
255 256anti-parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
59 62first strand
Strand 2
B
337 342parallel
Strand 3
B
306 309parallel
Strand 4
B
277 280parallel
Strand 5
B
218 223parallel
Strand 6
B
172 176parallel
Strand 7
B
144 147parallel
Strand 8
B
81 83parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
192 193first strand
Strand 2
B
230 231parallel
Strand 3
B
255 256anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il