Analysis of interatomic Contacts of Structural Units in PDB entry:
3EOX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3EOX entry

There is 1 chain in PDB entry 3EOX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 1PRO 379
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 3EOX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 27Right-handed alpha
Helix 2
2
A
35 50Right-handed alpha
Helix 3
3
A
51 63Right-handed alpha
Helix 4
4
A
70 84Right-handed alpha
Helix 5
5
A
85 88Right-handed 310
Helix 6
6
A
108 115Right-handed alpha
Helix 7
7
A
128 143Right-handed alpha
Helix 8
8
A
180 184Right-handed 310
Helix 9
9
A
247 252Right-handed alpha
Helix 10
10
A
255 265Right-handed alpha
Helix 11
11
A
286 293Right-handed alpha
Helix 12
12
A
296 300Right-handed 310
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There are 3 sheets in PDB entry 3EOX. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 34first strand
Strand 2
A
369 376anti-parallel
Strand 3
A
358 364anti-parallel
Strand 4
A
233 240anti-parallel
Strand 5
A
220 227anti-parallel
Strand 6
A
196 214anti-parallel
Strand 7
A
185 190anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 34first strand
Strand 2
A
369 376anti-parallel
Strand 3
A
358 364anti-parallel
Strand 4
A
233 240anti-parallel
Strand 5
A
220 227anti-parallel
Strand 6
A
196 214anti-parallel
Strand 7
A
267 276anti-parallel
Strand 8
A
352 353parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
122 124first strand
Strand 2
A
90 100parallel
Strand 3
A
163 174anti-parallel
Strand 4
A
332 342anti-parallel
Strand 5
A
319 328anti-parallel
Strand 6
A
278 285anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il