Analysis of interatomic Contacts of Structural Units in PDB entry:
3EOZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3EOZ entry

There are 2 chains in PDB entry 3EOZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 19PHE 214
B
 THR 21PHE 214
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 3EOZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
46 65Right-handed alpha
Helix 2
2
A
77 89Right-handed alpha
Helix 3
3
A
100 103Right-handed 310
Helix 4
4
A
130 139Right-handed alpha
Helix 5
5
A
155 168Right-handed alpha
Helix 6
6
A
170 178Right-handed alpha
Helix 7
7
A
200 204Right-handed 310
Helix 8
8
B
48 65Right-handed alpha
Helix 9
9
B
77 89Right-handed alpha
Helix 10
10
B
100 103Right-handed 310
Helix 11
11
B
113 140Right-handed alpha
Helix 12
12
B
155 167Right-handed alpha
Helix 13
13
B
170 177Right-handed alpha
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There are 2 sheets in PDB entry 3EOZ. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
95 98first strand
Strand 2
A
69 74parallel
Strand 3
A
148 154parallel
Strand 4
A
21 28parallel
Strand 5
A
184 190anti-parallel
Strand 6
A
195 198anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
209 213first strand
Strand 2
B
206 213anti-parallel
Strand 3
B
196 203anti-parallel
Strand 4
B
182 189anti-parallel
Strand 5
B
22 28anti-parallel
Strand 6
B
148 154parallel
Strand 7
B
68 74parallel
Strand 8
B
95 98parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il