Analysis of interatomic Contacts of Structural Units in PDB entry:
3ES2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ES2 entry

There are 2 chains in PDB entry 3ES2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 145ASN 392
B
 GLU 144SER 390
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 10 helices in PDB entry 3ES2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
148 165Right-handed alpha
Helix 2
2
A
215 236Right-handed alpha
Helix 3
3
A
247 260Right-handed alpha
Helix 4
4
A
347 362Right-handed alpha
Helix 5
5
A
365 371Right-handed alpha
Helix 6
6
B
146 165Right-handed alpha
Helix 7
7
B
215 235Right-handed alpha
Helix 8
8
B
246 260Right-handed alpha
Helix 9
9
B
348 362Right-handed alpha
Helix 10
10
B
365 374Right-handed alpha
Back to top of page

There are 5 sheets in PDB entry 3ES2. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 174first strand
Strand 2
A
177 184anti-parallel
Strand 3
A
384 390anti-parallel
Strand 4
A
331 333anti-parallel
Strand 5
A
293 294anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
192 195first strand
Strand 2
A
203 211anti-parallel
Strand 3
A
198 199anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
192 195first strand
Strand 2
A
203 211anti-parallel
Strand 3
A
267 275anti-parallel
Strand 4
A
280 285anti-parallel
Strand 5
A
320 324anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
172 174first strand
Strand 2
B
177 184anti-parallel
Strand 3
B
384 389anti-parallel
Strand 4
B
331 334anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
193 195first strand
Strand 2
B
205 211anti-parallel
Strand 3
B
267 275anti-parallel
Strand 4
B
280 285anti-parallel
Strand 5
B
321 324anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il