Analysis of interatomic Contacts of Structural Units in PDB entry:
3ES9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ES9 entry

There are 3 chains in PDB entry 3ES9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 66SER 678
B
 MET 73SER 678
C
 GLU 234SER 678
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 55 helices in PDB entry 3ES9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
70 75Right-handed alpha
Helix 2
2
A
89 100Right-handed alpha
Helix 3
3
A
118 128Right-handed 310
Helix 4
4
A
149 159Right-handed alpha
Helix 5
5
A
182 196Right-handed alpha
Helix 6
6
A
211 232Right-handed alpha
Helix 7
7
A
254 258Right-handed 310
Helix 8
8
A
327 339Right-handed alpha
Helix 9
9
A
366 374Right-handed alpha
Helix 10
10
A
382 389Right-handed alpha
Helix 11
11
A
396 405Right-handed alpha
Helix 12
12
A
410 420Right-handed alpha
Helix 13
13
A
426 434Right-handed alpha
Helix 14
14
A
440 448Right-handed alpha
Helix 15
15
A
488 497Right-handed alpha
Helix 16
16
A
533 535Right-handed 310
Helix 17
17
A
536 553Right-handed alpha
Helix 18
18
A
575 586Right-handed alpha
Helix 19
19
A
606 622Right-handed alpha
Helix 20
20
A
635 651Right-handed alpha
Helix 21
21
A
655 668Right-handed alpha
Helix 22
22
B
89 104Right-handed alpha
Helix 23
23
B
120 124Right-handed 310
Helix 24
24
B
212 220Right-handed alpha
Helix 25
25
B
222 228Right-handed alpha
Helix 26
26
B
229 231Right-handed 310
Helix 27
27
B
327 338Right-handed alpha
Helix 28
28
B
366 374Right-handed alpha
Helix 29
29
B
382 391Right-handed alpha
Helix 30
30
B
395 407Right-handed alpha
Helix 31
31
B
426 434Right-handed alpha
Helix 32
32
B
440 448Right-handed alpha
Helix 33
33
B
489 496Right-handed alpha
Helix 34
34
B
533 535Right-handed 310
Helix 35
35
B
536 553Right-handed alpha
Helix 36
36
B
575 585Right-handed alpha
Helix 37
37
B
604 612Right-handed alpha
Helix 38
38
B
612 623Right-handed alpha
Helix 39
39
B
635 652Right-handed alpha
Helix 40
40
B
655 668Right-handed alpha
Helix 41
41
C
327 335Right-handed alpha
Helix 42
42
C
367 374Right-handed alpha
Helix 43
43
C
382 391Right-handed alpha
Helix 44
44
C
395 404Right-handed alpha
Helix 45
45
C
410 420Right-handed alpha
Helix 46
46
C
426 433Right-handed alpha
Helix 47
47
C
442 448Right-handed alpha
Helix 48
48
C
488 497Right-handed alpha
Helix 49
49
C
533 536Right-handed 310
Helix 50
50
C
537 553Right-handed alpha
Helix 51
51
C
575 586Right-handed alpha
Helix 52
52
C
604 610Right-handed alpha
Helix 53
53
C
612 621Right-handed alpha
Helix 54
54
C
635 651Right-handed alpha
Helix 55
55
C
655 668Right-handed alpha
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There are 16 sheets in PDB entry 3ES9. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
110 112first strand
Strand 2
A
81 85parallel
Strand 3
A
133 137parallel
Strand 4
A
167 174parallel
Strand 5
A
198 199parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
110 112first strand
Strand 2
A
81 85parallel
Strand 3
A
133 137parallel
Strand 4
A
167 174parallel
Strand 5
A
204 207parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
139 140first strand
Strand 2
A
144 145anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
245 247first strand
Strand 2
A
348 350anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
454 457first strand
Strand 2
A
319 322anti-parallel
Strand 3
A
508 514anti-parallel
Strand 4
A
282 291anti-parallel
Strand 5
A
300 306anti-parallel
Strand 6
A
468 474anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
477 479first strand
Strand 2
A
485 487anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
592 595first strand
Strand 2
A
560 566parallel
Strand 3
A
528 531parallel
Strand 4
A
626 629parallel
Strand 5
A
672 674parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
245 249first strand
Strand 2
B
346 350anti-parallel
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There are 6 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
454 457first strand
Strand 2
B
319 322anti-parallel
Strand 3
B
508 514anti-parallel
Strand 4
B
282 291anti-parallel
Strand 5
B
300 306anti-parallel
Strand 6
B
469 474anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
477 480first strand
Strand 2
B
484 487anti-parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
560 563first strand
Strand 2
B
528 531parallel
Strand 3
B
626 632parallel
Strand 4
B
672 677parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
565 566first strand
Strand 2
B
594 595parallel
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There are 3 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
245 248first strand
Strand 2
C
345 350anti-parallel
Strand 3
C
365 366anti-parallel
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There are 6 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
454 457first strand
Strand 2
C
319 322anti-parallel
Strand 3
C
508 514anti-parallel
Strand 4
C
282 291anti-parallel
Strand 5
C
300 306anti-parallel
Strand 6
C
468 474anti-parallel
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There are 3 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
528 531first strand
Strand 2
C
626 629parallel
Strand 3
C
672 674parallel
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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
561 563first strand
Strand 2
C
590 592parallel
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