Analysis of interatomic Contacts of Structural Units in PDB entry:
3ESW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ESW entry

There are 3 chains in PDB entry 3ESW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER -3ARG 190
A
 GLY 192GLN 329
B
 SER 254ALA 308
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 19 helices in PDB entry 3ESW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 31Right-handed alpha
Helix 2
2
A
35 49Right-handed alpha
Helix 3
3
A
49 63Right-handed alpha
Helix 4
4
A
68 79Right-handed alpha
Helix 5
5
A
80 94Right-handed alpha
Helix 6
6
A
102 119Right-handed alpha
Helix 7
7
A
149 154Right-handed alpha
Helix 8
8
A
179 187Right-handed alpha
Helix 9
9
A
190 205Right-handed alpha
Helix 10
10
A
226 229Right-handed 310
Helix 11
11
A
244 249Right-handed alpha
Helix 12
12
A
269 274Right-handed alpha
Helix 13
13
A
285 300Right-handed alpha
Helix 14
14
A
305 325Right-handed alpha
Helix 15
15
B
258 269Right-handed alpha
Helix 16
16
B
272 274Right-handed 310
Helix 17
17
B
275 287Right-handed alpha
Helix 18
18
B
287 297Right-handed alpha
Helix 19
19
B
297 306Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 3ESW. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
122 123first strand
Strand 2
A
188 189parallel
Back to list of sheets
Back to top of page

There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
140 146first strand
Strand 2
A
157 165anti-parallel
Strand 3
A
171 177anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
230 234first strand
Strand 2
A
218 225anti-parallel
Strand 3
A
209 214anti-parallel
Strand 4
A
258 262anti-parallel
Strand 5
A
265 268anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il