Analysis of interatomic Contacts of Structural Units in PDB entry:
3ETE

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3ETE entry

There are 6 chains in PDB entry 3ETE (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 4	VAL 498
B	GLU 4	VAL 498
C	GLU 4	VAL 498
D	GLU 4	VAL 498
E	GLU 4	VAL 498
F	GLU 4	VAL 498

There are121 helices in PDB entry 3ETE. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	8	32	Right-handed alpha
Helix 2	2	A	40	53	Right-handed alpha
Helix 3	3	A	100	119	Right-handed alpha
Helix 4	4	A	132	136	Right-handed 310
Helix 5	5	A	137	154	Right-handed alpha
Helix 6	6	A	172	186	Right-handed alpha
Helix 7	7	A	193	197	Right-handed 310
Helix 8	8	A	202	206	Right-handed 310
Helix 9	9	A	213	227	Right-handed alpha
Helix 10	10	A	230	236	Right-handed alpha
Helix 11	11	A	253	266	Right-handed alpha
Helix 12	12	A	287	299	Right-handed alpha
Helix 13	13	A	335	339	Right-handed 310
Helix 14	14	A	353	363	Right-handed alpha
Helix 15	15	A	369	374	Right-handed alpha
Helix 16	16	A	375	391	Right-handed alpha
Helix 17	17	A	398	421	Right-handed alpha
Helix 18	18	A	433	438	Right-handed alpha
Helix 19	19	A	444	471	Right-handed alpha
Helix 20	20	A	476	496	Right-handed alpha
Helix 21	21	B	8	32	Right-handed alpha
Helix 22	22	B	40	53	Right-handed alpha
Helix 23	23	B	100	119	Right-handed alpha
Helix 24	24	B	132	136	Right-handed 310
Helix 25	25	B	137	154	Right-handed alpha
Helix 26	26	B	172	186	Right-handed alpha
Helix 27	27	B	193	197	Right-handed 310
Helix 28	28	B	202	206	Right-handed 310
Helix 29	29	B	213	227	Right-handed alpha
Helix 30	30	B	230	236	Right-handed alpha
Helix 31	31	B	253	266	Right-handed alpha
Helix 32	32	B	287	299	Right-handed alpha
Helix 33	33	B	335	339	Right-handed 310
Helix 34	34	B	353	363	Right-handed alpha
Helix 35	35	B	369	374	Right-handed alpha
Helix 36	36	B	375	391	Right-handed alpha
Helix 37	37	B	398	421	Right-handed alpha
Helix 38	38	B	433	438	Right-handed alpha
Helix 39	39	B	444	471	Right-handed alpha
Helix 40	40	B	476	495	Right-handed alpha
Helix 41	41	C	8	31	Right-handed alpha
Helix 42	42	C	40	53	Right-handed alpha
Helix 43	43	C	100	119	Right-handed alpha
Helix 44	44	C	132	136	Right-handed 310
Helix 45	45	C	137	154	Right-handed alpha
Helix 46	46	C	172	186	Right-handed alpha
Helix 47	47	C	193	197	Right-handed 310
Helix 48	48	C	202	206	Right-handed 310
Helix 49	49	C	213	227	Right-handed alpha
Helix 50	50	C	230	236	Right-handed alpha
Helix 51	51	C	253	266	Right-handed alpha
Helix 52	52	C	287	299	Right-handed alpha
Helix 53	53	C	335	339	Right-handed 310
Helix 54	54	C	353	363	Right-handed alpha
Helix 55	55	C	369	374	Right-handed alpha
Helix 56	56	C	375	391	Right-handed alpha
Helix 57	57	C	398	421	Right-handed alpha
Helix 58	58	C	421	426	Right-handed alpha
Helix 59	59	C	433	438	Right-handed alpha
Helix 60	60	C	444	471	Right-handed alpha
Helix 61	61	C	476	496	Right-handed alpha
Helix 62	62	D	8	31	Right-handed alpha
Helix 63	63	D	40	53	Right-handed alpha
Helix 64	64	D	100	119	Right-handed alpha
Helix 65	65	D	132	136	Right-handed 310
Helix 66	66	D	137	154	Right-handed alpha
Helix 67	67	D	172	186	Right-handed alpha
Helix 68	68	D	193	197	Right-handed 310
Helix 69	69	D	202	206	Right-handed 310
Helix 70	70	D	213	227	Right-handed alpha
Helix 71	71	D	230	236	Right-handed alpha
Helix 72	72	D	253	266	Right-handed alpha
Helix 73	73	D	287	299	Right-handed alpha
Helix 74	74	D	335	339	Right-handed 310
Helix 75	75	D	353	363	Right-handed alpha
Helix 76	76	D	369	374	Right-handed alpha
Helix 77	77	D	375	391	Right-handed alpha
Helix 78	78	D	398	421	Right-handed alpha
Helix 79	79	D	433	438	Right-handed alpha
Helix 80	80	D	444	471	Right-handed alpha
Helix 81	81	D	476	495	Right-handed alpha
Helix 82	82	E	8	31	Right-handed alpha
Helix 83	83	E	40	53	Right-handed alpha
Helix 84	84	E	100	119	Right-handed alpha
Helix 85	85	E	132	136	Right-handed 310
Helix 86	86	E	137	154	Right-handed alpha
Helix 87	87	E	172	186	Right-handed alpha
Helix 88	88	E	193	197	Right-handed 310
Helix 89	89	E	202	206	Right-handed 310
Helix 90	90	E	213	227	Right-handed alpha
Helix 91	91	E	230	236	Right-handed alpha
Helix 92	92	E	253	266	Right-handed alpha
Helix 93	93	E	287	299	Right-handed alpha
Helix 94	94	E	335	339	Right-handed 310
Helix 95	95	E	353	363	Right-handed alpha
Helix 96	96	E	369	374	Right-handed alpha
Helix 97	97	E	375	391	Right-handed alpha
Helix 98	98	E	398	421	Right-handed alpha
Helix 99	99	E	433	438	Right-handed alpha
Helix 100	100	E	444	471	Right-handed alpha
Helix 101	101	E	476	495	Right-handed alpha
Helix 102	102	F	8	31	Right-handed alpha
Helix 103	103	F	40	53	Right-handed alpha
Helix 104	104	F	100	119	Right-handed alpha
Helix 105	105	F	132	136	Right-handed 310
Helix 106	106	F	137	154	Right-handed alpha
Helix 107	107	F	172	186	Right-handed alpha
Helix 108	108	F	193	197	Right-handed 310
Helix 109	109	F	202	206	Right-handed 310
Helix 110	110	F	213	227	Right-handed alpha
Helix 111	111	F	230	236	Right-handed alpha
Helix 112	112	F	253	266	Right-handed alpha
Helix 113	113	F	287	299	Right-handed alpha
Helix 114	114	F	335	339	Right-handed 310
Helix 115	115	F	353	363	Right-handed alpha
Helix 116	116	F	369	374	Right-handed alpha
Helix 117	117	F	375	391	Right-handed alpha
Helix 118	118	F	398	421	Right-handed alpha
Helix 119	119	F	433	438	Right-handed alpha
Helix 120	120	F	444	471	Right-handed alpha
Helix 121	121	F	476	495	Right-handed alpha

There are 12 sheets in PDB entry 3ETE. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	93	95	first strand
Strand 2	A	123	129	parallel
Strand 3	A	72	81	anti-parallel
Strand 4	A	57	66	anti-parallel
Strand 5	D	57	66	anti-parallel
Strand 6	D	72	81	anti-parallel
Strand 7	D	123	129	anti-parallel
Strand 8	D	93	95	parallel

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There are 10 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	163	164	first strand
Strand 2	A	89	90	parallel
Strand 3	A	123	129	parallel
Strand 4	A	72	81	anti-parallel
Strand 5	A	57	66	anti-parallel
Strand 6	D	57	66	anti-parallel
Strand 7	D	72	81	anti-parallel
Strand 8	D	123	129	anti-parallel
Strand 9	D	89	90	parallel
Strand 10	D	163	164	parallel

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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	279	286	first strand
Strand 2	A	269	274	anti-parallel
Strand 3	A	246	250	parallel
Strand 4	A	321	324	parallel
Strand 5	A	343	345	parallel
Strand 6	A	366	368	parallel

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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	93	95	first strand
Strand 2	B	123	129	parallel
Strand 3	B	72	81	anti-parallel
Strand 4	B	57	66	anti-parallel
Strand 5	E	57	66	anti-parallel
Strand 6	E	72	81	anti-parallel
Strand 7	E	123	129	anti-parallel
Strand 8	E	93	95	parallel

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There are 10 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	163	164	first strand
Strand 2	B	89	90	parallel
Strand 3	B	123	129	parallel
Strand 4	B	72	81	anti-parallel
Strand 5	B	57	66	anti-parallel
Strand 6	E	57	66	anti-parallel
Strand 7	E	72	81	anti-parallel
Strand 8	E	123	129	anti-parallel
Strand 9	E	89	90	parallel
Strand 10	E	163	164	parallel

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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	279	286	first strand
Strand 2	B	268	274	anti-parallel
Strand 3	B	245	250	parallel
Strand 4	B	321	324	parallel
Strand 5	B	343	345	parallel
Strand 6	B	366	368	parallel

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There are 8 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	93	95	first strand
Strand 2	C	123	129	parallel
Strand 3	C	72	81	anti-parallel
Strand 4	C	57	66	anti-parallel
Strand 5	F	57	66	anti-parallel
Strand 6	F	72	81	anti-parallel
Strand 7	F	123	129	anti-parallel
Strand 8	F	93	95	parallel

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There are 10 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	163	164	first strand
Strand 2	C	89	90	parallel
Strand 3	C	123	129	parallel
Strand 4	C	72	81	anti-parallel
Strand 5	C	57	66	anti-parallel
Strand 6	F	57	66	anti-parallel
Strand 7	F	72	81	anti-parallel
Strand 8	F	123	129	anti-parallel
Strand 9	F	89	90	parallel
Strand 10	F	163	164	parallel

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There are 6 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	279	286	first strand
Strand 2	C	269	274	anti-parallel
Strand 3	C	246	250	parallel
Strand 4	C	321	324	parallel
Strand 5	C	343	345	parallel
Strand 6	C	366	368	parallel

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There are 6 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	279	286	first strand
Strand 2	D	269	274	anti-parallel
Strand 3	D	246	250	parallel
Strand 4	D	321	324	parallel
Strand 5	D	343	345	parallel
Strand 6	D	366	368	parallel

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There are 6 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	279	286	first strand
Strand 2	E	268	274	anti-parallel
Strand 3	E	245	250	parallel
Strand 4	E	321	324	parallel
Strand 5	E	343	345	parallel
Strand 6	E	366	368	parallel

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There are 6 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	279	286	first strand
Strand 2	F	268	274	anti-parallel
Strand 3	F	245	250	parallel
Strand 4	F	321	324	parallel
Strand 5	F	343	345	parallel
Strand 6	F	366	368	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3ETE

Analysis of interatomic Contacts of Structural Units in PDB entry:
3ETE