Analysis of interatomic Contacts of Structural Units in PDB entry:
3EUA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3EUA entry

There are 8 chains in PDB entry 3EUA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ALA 4TYR 328
B
THR 5TYR 328
C
THR 5TYR 328
D
THR 5TYR 328
E
THR 5TYR 328
F
GLY 0TYR 328
G
MSE 1TYR 328
H
SER 2TYR 328
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are132 helices in PDB entry 3EUA. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
4 8Right-handed 310
Helix 2
2
A
9 20Right-handed alpha
Helix 3
3
A
33 38Right-handed alpha
Helix 4
4
A
39 50Right-handed alpha
Helix 5
5
A
60 67Right-handed alpha
Helix 6
6
A
86 99Right-handed alpha
Helix 7
7
A
112 118Right-handed alpha
Helix 8
8
A
131 134Right-handed 310
Helix 9
9
A
135 153Right-handed alpha
Helix 10
10
A
156 190Right-handed alpha
Helix 11
11
A
200 202Right-handed 310
Helix 12
12
A
203 213Right-handed alpha
Helix 13
13
A
215 220Right-handed alpha
Helix 14
14
A
229 239Right-handed 310
Helix 15
15
A
254 269Right-handed alpha
Helix 16
16
A
278 280Right-handed 310
Helix 17
17
A
286 313Right-handed alpha
Helix 18
18
B
9 20Right-handed alpha
Helix 19
19
B
33 38Right-handed alpha
Helix 20
20
B
39 50Right-handed alpha
Helix 21
21
B
60 67Right-handed alpha
Helix 22
22
B
86 99Right-handed alpha
Helix 23
23
B
112 118Right-handed alpha
Helix 24
24
B
131 134Right-handed 310
Helix 25
25
B
135 153Right-handed alpha
Helix 26
26
B
156 190Right-handed alpha
Helix 27
27
B
200 202Right-handed 310
Helix 28
28
B
203 213Right-handed alpha
Helix 29
29
B
215 220Right-handed alpha
Helix 30
30
B
229 239Right-handed 310
Helix 31
31
B
254 269Right-handed alpha
Helix 32
32
B
278 280Right-handed 310
Helix 33
33
B
289 314Right-handed alpha
Helix 34
34
C
9 20Right-handed alpha
Helix 35
35
C
33 38Right-handed alpha
Helix 36
36
C
39 50Right-handed alpha
Helix 37
37
C
60 67Right-handed alpha
Helix 38
38
C
86 99Right-handed alpha
Helix 39
39
C
112 118Right-handed alpha
Helix 40
40
C
131 134Right-handed 310
Helix 41
41
C
135 153Right-handed alpha
Helix 42
42
C
156 190Right-handed alpha
Helix 43
43
C
200 202Right-handed 310
Helix 44
44
C
203 213Right-handed alpha
Helix 45
45
C
215 220Right-handed alpha
Helix 46
46
C
229 239Right-handed 310
Helix 47
47
C
254 269Right-handed alpha
Helix 48
48
C
278 280Right-handed 310
Helix 49
49
C
289 313Right-handed alpha
Helix 50
50
D
9 20Right-handed alpha
Helix 51
51
D
33 38Right-handed alpha
Helix 52
52
D
39 50Right-handed alpha
Helix 53
53
D
60 67Right-handed alpha
Helix 54
54
D
86 99Right-handed alpha
Helix 55
55
D
112 118Right-handed alpha
Helix 56
56
D
131 134Right-handed 310
Helix 57
57
D
135 153Right-handed alpha
Helix 58
58
D
156 189Right-handed alpha
Helix 59
59
D
200 202Right-handed 310
Helix 60
60
D
203 213Right-handed alpha
Helix 61
61
D
215 220Right-handed alpha
Helix 62
62
D
229 239Right-handed 310
Helix 63
63
D
254 269Right-handed alpha
Helix 64
64
D
278 280Right-handed 310
Helix 65
65
D
289 314Right-handed alpha
Helix 66
66
E
9 20Right-handed alpha
Helix 67
67
E
33 38Right-handed alpha
Helix 68
68
E
39 50Right-handed alpha
Helix 69
69
E
60 67Right-handed alpha
Helix 70
70
E
86 99Right-handed alpha
Helix 71
71
E
112 118Right-handed alpha
Helix 72
72
E
131 134Right-handed 310
Helix 73
73
E
135 153Right-handed alpha
Helix 74
74
E
156 190Right-handed alpha
Helix 75
75
E
200 202Right-handed 310
Helix 76
76
E
203 213Right-handed alpha
Helix 77
77
E
215 220Right-handed alpha
Helix 78
78
E
229 239Right-handed 310
Helix 79
79
E
254 269Right-handed alpha
Helix 80
80
E
278 280Right-handed 310
Helix 81
81
E
289 314Right-handed alpha
Helix 82
82
F
0 7Right-handed alpha
Helix 83
83
F
9 20Right-handed alpha
Helix 84
84
F
33 38Right-handed alpha
Helix 85
85
F
39 50Right-handed alpha
Helix 86
86
F
60 67Right-handed alpha
Helix 87
87
F
86 99Right-handed alpha
Helix 88
88
F
112 118Right-handed alpha
Helix 89
89
F
131 134Right-handed 310
Helix 90
90
F
135 153Right-handed alpha
Helix 91
91
F
156 190Right-handed alpha
Helix 92
92
F
200 202Right-handed 310
Helix 93
93
F
203 213Right-handed alpha
Helix 94
94
F
215 220Right-handed alpha
Helix 95
95
F
229 239Right-handed 310
Helix 96
96
F
254 269Right-handed alpha
Helix 97
97
F
278 280Right-handed 310
Helix 98
98
F
289 314Right-handed alpha
Helix 99
99
G
1 7Right-handed alpha
Helix 100
100
G
9 20Right-handed alpha
Helix 101
101
G
33 38Right-handed alpha
Helix 102
102
G
39 50Right-handed alpha
Helix 103
103
G
60 67Right-handed alpha
Helix 104
104
G
86 99Right-handed alpha
Helix 105
105
G
112 118Right-handed alpha
Helix 106
106
G
131 134Right-handed 310
Helix 107
107
G
135 153Right-handed alpha
Helix 108
108
G
156 189Right-handed alpha
Helix 109
109
G
200 202Right-handed 310
Helix 110
110
G
203 213Right-handed alpha
Helix 111
111
G
215 220Right-handed alpha
Helix 112
112
G
229 239Right-handed 310
Helix 113
113
G
254 269Right-handed alpha
Helix 114
114
G
278 280Right-handed 310
Helix 115
115
G
286 314Right-handed alpha
Helix 116
116
H
4 8Right-handed 310
Helix 117
117
H
9 20Right-handed alpha
Helix 118
118
H
33 38Right-handed alpha
Helix 119
119
H
39 50Right-handed alpha
Helix 120
120
H
60 67Right-handed alpha
Helix 121
121
H
86 99Right-handed alpha
Helix 122
122
H
112 118Right-handed alpha
Helix 123
123
H
131 134Right-handed 310
Helix 124
124
H
135 153Right-handed alpha
Helix 125
125
H
156 190Right-handed alpha
Helix 126
126
H
200 202Right-handed 310
Helix 127
127
H
203 213Right-handed alpha
Helix 128
128
H
215 220Right-handed alpha
Helix 129
129
H
229 239Right-handed 310
Helix 130
130
H
254 269Right-handed alpha
Helix 131
131
H
278 280Right-handed 310
Helix 132
132
H
289 314Right-handed alpha
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There are 16 sheets in PDB entry 3EUA. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
54 59first strand
Strand 2
A
26 31parallel
Strand 3
A
75 81parallel
Strand 4
A
102 107parallel
Strand 5
A
120 123parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
225 227first strand
Strand 2
A
196 199parallel
Strand 3
A
245 249parallel
Strand 4
A
272 276parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
54 59first strand
Strand 2
B
26 31parallel
Strand 3
B
75 80parallel
Strand 4
B
102 107parallel
Strand 5
B
120 123parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
225 227first strand
Strand 2
B
196 199parallel
Strand 3
B
245 249parallel
Strand 4
B
272 276parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
54 59first strand
Strand 2
C
26 31parallel
Strand 3
C
75 81parallel
Strand 4
C
102 107parallel
Strand 5
C
120 123parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
225 227first strand
Strand 2
C
196 199parallel
Strand 3
C
245 249parallel
Strand 4
C
272 276parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
54 59first strand
Strand 2
D
26 31parallel
Strand 3
D
75 80parallel
Strand 4
D
102 107parallel
Strand 5
D
120 123parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
225 227first strand
Strand 2
D
196 199parallel
Strand 3
D
245 249parallel
Strand 4
D
272 276parallel
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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
54 59first strand
Strand 2
E
26 31parallel
Strand 3
E
75 80parallel
Strand 4
E
102 107parallel
Strand 5
E
120 123parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
225 227first strand
Strand 2
E
196 199parallel
Strand 3
E
245 249parallel
Strand 4
E
272 276parallel
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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
54 59first strand
Strand 2
F
26 31parallel
Strand 3
F
75 81parallel
Strand 4
F
102 107parallel
Strand 5
F
120 123parallel
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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
225 227first strand
Strand 2
F
196 199parallel
Strand 3
F
245 249parallel
Strand 4
F
272 276parallel
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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
54 59first strand
Strand 2
G
26 31parallel
Strand 3
G
75 80parallel
Strand 4
G
102 107parallel
Strand 5
G
120 123parallel
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There are 4 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
225 227first strand
Strand 2
G
196 199parallel
Strand 3
G
245 249parallel
Strand 4
G
272 276parallel
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There are 5 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
54 59first strand
Strand 2
H
26 31parallel
Strand 3
H
75 80parallel
Strand 4
H
102 107parallel
Strand 5
H
120 123parallel
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There are 4 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
225 227first strand
Strand 2
H
196 199parallel
Strand 3
H
245 249parallel
Strand 4
H
272 276parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il