Analysis of interatomic Contacts of Structural Units in PDB entry:
3EUE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3EUE entry

There is 1 chain in PDB entry 3EUE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 16ALA 310
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 3EUE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
25 29Right-handed 310
Helix 2
2
A
45 51Right-handed alpha
Helix 3
3
A
61 76Right-handed alpha
Helix 4
4
A
111 129Right-handed alpha
Helix 5
5
A
183 198Right-handed alpha
Helix 6
6
A
228 242Right-handed alpha
Helix 7
7
A
250 261Right-handed alpha
Helix 8
8
A
276 278Right-handed 310
Helix 9
9
A
284 293Right-handed alpha
Helix 10
10
A
293 309Right-handed alpha
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There are 3 sheets in PDB entry 3EUE. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 34first strand
Strand 2
A
39 40anti-parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
97 100first strand
Strand 2
A
103 107anti-parallel
Strand 3
A
55 59parallel
Strand 4
A
135 144parallel
Strand 5
A
264 274parallel
Strand 6
A
152 159anti-parallel
Strand 7
A
202 209parallel
Strand 8
A
244 248parallel
Strand 9
A
135 144anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
166 171first strand
Strand 2
A
174 179anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il