Analysis of interatomic Contacts of Structural Units in PDB entry:
3EUF

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3EUF entry

There are 4 chains in PDB entry 3EUF (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 16	SER 308
B	ASP 16	SER 308
C	ASP 16	LYS 309
D	ASP 16	LYS 309

There are 43 helices in PDB entry 3EUF. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	25	29	Right-handed 310
Helix 2	2	A	45	51	Right-handed alpha
Helix 3	3	A	61	77	Right-handed alpha
Helix 4	4	A	111	129	Right-handed alpha
Helix 5	5	A	183	198	Right-handed alpha
Helix 6	6	A	214	218	Right-handed 310
Helix 7	7	A	228	242	Right-handed alpha
Helix 8	8	A	250	261	Right-handed alpha
Helix 9	9	A	284	293	Right-handed alpha
Helix 10	10	A	293	307	Right-handed alpha
Helix 11	11	B	23	27	Right-handed 310
Helix 12	12	B	35	38	Right-handed 310
Helix 13	13	B	45	51	Right-handed alpha
Helix 14	14	B	61	76	Right-handed alpha
Helix 15	15	B	111	129	Right-handed alpha
Helix 16	16	B	183	198	Right-handed alpha
Helix 17	17	B	214	218	Right-handed 310
Helix 18	18	B	228	242	Right-handed alpha
Helix 19	19	B	250	261	Right-handed alpha
Helix 20	20	B	276	278	Right-handed 310
Helix 21	21	B	284	308	Right-handed alpha
Helix 22	22	C	23	27	Right-handed 310
Helix 23	23	C	35	38	Right-handed 310
Helix 24	24	C	45	51	Right-handed alpha
Helix 25	25	C	61	76	Right-handed alpha
Helix 26	26	C	111	129	Right-handed alpha
Helix 27	27	C	183	198	Right-handed alpha
Helix 28	28	C	214	218	Right-handed 310
Helix 29	29	C	228	242	Right-handed alpha
Helix 30	30	C	250	261	Right-handed alpha
Helix 31	31	C	276	278	Right-handed 310
Helix 32	32	C	284	309	Right-handed alpha
Helix 33	33	D	24	29	Right-handed alpha
Helix 34	34	D	35	38	Right-handed 310
Helix 35	35	D	45	51	Right-handed alpha
Helix 36	36	D	61	76	Right-handed alpha
Helix 37	37	D	111	129	Right-handed alpha
Helix 38	38	D	183	198	Right-handed alpha
Helix 39	39	D	214	218	Right-handed 310
Helix 40	40	D	228	242	Right-handed alpha
Helix 41	41	D	250	261	Right-handed alpha
Helix 42	42	D	284	293	Right-handed alpha
Helix 43	43	D	293	308	Right-handed alpha

There are 12 sheets in PDB entry 3EUF. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	33	34	first strand
Strand 2	A	39	40	anti-parallel

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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	97	100	first strand
Strand 2	A	103	107	anti-parallel
Strand 3	A	55	59	parallel
Strand 4	A	135	144	parallel
Strand 5	A	264	274	parallel
Strand 6	A	152	159	anti-parallel
Strand 7	A	202	209	parallel
Strand 8	A	244	248	parallel
Strand 9	A	135	144	anti-parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	166	171	first strand
Strand 2	A	174	179	anti-parallel

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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	33	34	first strand
Strand 2	B	39	40	anti-parallel

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There are 9 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	97	100	first strand
Strand 2	B	103	107	anti-parallel
Strand 3	B	55	59	parallel
Strand 4	B	135	144	parallel
Strand 5	B	264	274	parallel
Strand 6	B	152	159	anti-parallel
Strand 7	B	202	209	parallel
Strand 8	B	244	248	parallel
Strand 9	B	135	144	anti-parallel

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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	166	171	first strand
Strand 2	B	174	179	anti-parallel

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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	33	34	first strand
Strand 2	C	39	40	anti-parallel

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There are 9 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	97	100	first strand
Strand 2	C	103	107	anti-parallel
Strand 3	C	55	59	parallel
Strand 4	C	135	144	parallel
Strand 5	C	264	274	parallel
Strand 6	C	152	159	anti-parallel
Strand 7	C	202	209	parallel
Strand 8	C	244	248	parallel
Strand 9	C	135	144	anti-parallel

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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	166	171	first strand
Strand 2	C	174	179	anti-parallel

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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	33	34	first strand
Strand 2	D	39	40	anti-parallel

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There are 9 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	97	100	first strand
Strand 2	D	103	107	anti-parallel
Strand 3	D	55	59	parallel
Strand 4	D	135	144	parallel
Strand 5	D	264	274	parallel
Strand 6	D	152	159	anti-parallel
Strand 7	D	202	209	parallel
Strand 8	D	244	248	parallel
Strand 9	D	135	144	anti-parallel

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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	166	171	first strand
Strand 2	D	174	179	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3EUF

Analysis of interatomic Contacts of Structural Units in PDB entry:
3EUF