Analysis of interatomic Contacts of Structural Units in PDB entry:
3EUJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3EUJ entry

There are 2 chains in PDB entry 3EUJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 32GLY 1496
B
 ASP 354LYS 443
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 24 helices in PDB entry 3EUJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
70 83Right-handed alpha
Helix 2
2
A
108 112Right-handed 310
Helix 3
3
A
162 167Right-handed alpha
Helix 4
4
A
179 187Right-handed alpha
Helix 5
5
A
199 210Right-handed alpha
Helix 6
6
A
219 235Right-handed alpha
Helix 7
7
A
239 245Right-handed alpha
Helix 8
8
A
246 249Right-handed 310
Helix 9
9
A
258 263Right-handed alpha
Helix 10
10
A
1265 1287Right-handed alpha
Helix 11
11
A
1288 1291Right-handed 310
Helix 12
12
A
1308 1321Right-handed alpha
Helix 13
13
A
1335 1347Right-handed alpha
Helix 14
14
A
1362 1366Right-handed 310
Helix 15
15
A
1367 1370Right-handed 310
Helix 16
16
A
1389 1393Right-handed 310
Helix 17
17
A
1394 1417Right-handed alpha
Helix 18
18
A
1435 1439Right-handed 310
Helix 19
19
A
1440 1454Right-handed alpha
Helix 20
20
B
356 373Right-handed alpha
Helix 21
21
B
378 387Right-handed alpha
Helix 22
22
B
391 393Right-handed 310
Helix 23
23
B
394 409Right-handed alpha
Helix 24
24
B
413 418Right-handed 310
Back to top of page

There are 6 sheets in PDB entry 3EUJ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 55first strand
Strand 2
A
37 46anti-parallel
Strand 3
A
116 124anti-parallel
Strand 4
A
130 139anti-parallel
Strand 5
A
147 148anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 55first strand
Strand 2
A
37 46anti-parallel
Strand 3
A
116 124anti-parallel
Strand 4
A
130 139anti-parallel
Strand 5
A
151 155anti-parallel
Strand 6
A
195 196anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1430 1433first strand
Strand 2
A
1457 1462parallel
Strand 3
A
60 64parallel
Strand 4
A
1472 1475parallel
Strand 5
A
1490 1493anti-parallel
Strand 6
B
431 434anti-parallel
Strand 7
B
424 426anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
168 171first strand
Strand 2
A
174 177anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1298 1307first strand
Strand 2
A
1372 1380anti-parallel
Strand 3
A
1384 1387anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1478 1481first strand
Strand 2
A
1484 1487anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il