Analysis of interatomic Contacts of Structural Units in PDB entry:
3EUO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3EUO entry

There are 4 chains in PDB entry 3EUO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 10GLY 151
A
 SER 153ARG 388
B
 LEU 10GLY 151
B
 SER 153ARG 388
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 3EUO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
28 39Right-handed alpha
Helix 2
2
A
42 52Right-handed alpha
Helix 3
3
A
68 72Right-handed 310
Helix 4
4
A
78 90Right-handed alpha
Helix 5
5
A
90 106Right-handed alpha
Helix 6
6
A
108 112Right-handed 310
Helix 7
7
A
127 137Right-handed alpha
Helix 8
8
A
150 152Right-handed 310
Helix 9
9
A
153 172Right-handed alpha
Helix 10
10
A
186 188Right-handed 310
Helix 11
11
A
189 201Right-handed alpha
Helix 12
12
A
205 210Right-handed alpha
Helix 13
13
A
246 248Right-handed 310
Helix 14
14
A
266 287Right-handed alpha
Helix 15
15
A
288 290Right-handed 310
Helix 16
16
A
296 300Right-handed 310
Helix 17
17
A
308 320Right-handed alpha
Helix 18
18
A
322 325Right-handed 310
Helix 19
19
A
326 337Right-handed alpha
Helix 20
20
A
339 341Right-handed 310
Helix 21
21
A
342 352Right-handed alpha
Helix 22
22
A
353 358Right-handed alpha
Helix 23
23
A
359 364Right-handed 310
Helix 24
24
B
28 39Right-handed alpha
Helix 25
25
B
42 52Right-handed alpha
Helix 26
26
B
53 55Right-handed 310
Helix 27
27
B
68 72Right-handed 310
Helix 28
28
B
78 90Right-handed alpha
Helix 29
29
B
90 105Right-handed alpha
Helix 30
30
B
108 112Right-handed 310
Helix 31
31
B
127 137Right-handed alpha
Helix 32
32
B
150 152Right-handed 310
Helix 33
33
B
153 172Right-handed alpha
Helix 34
34
B
186 188Right-handed 310
Helix 35
35
B
189 201Right-handed alpha
Helix 36
36
B
205 210Right-handed alpha
Helix 37
37
B
246 248Right-handed 310
Helix 38
38
B
266 285Right-handed alpha
Helix 39
39
B
296 300Right-handed 310
Helix 40
40
B
308 320Right-handed alpha
Helix 41
41
B
322 325Right-handed 310
Helix 42
42
B
326 337Right-handed alpha
Helix 43
43
B
339 341Right-handed 310
Helix 44
44
B
342 352Right-handed alpha
Helix 45
45
B
353 358Right-handed alpha
Helix 46
46
B
359 364Right-handed 310
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There are 6 sheets in PDB entry 3EUO. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
143 147first strand
Strand 2
A
114 118parallel
Strand 3
A
177 184parallel
Strand 4
A
213 220anti-parallel
Strand 5
A
13 20anti-parallel
Strand 6
A
233 242anti-parallel
Strand 7
A
379 387anti-parallel
Strand 8
A
368 375anti-parallel
Strand 9
A
301 304parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 26first strand
Strand 2
A
60 62anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
258 263first strand
Strand 2
A
250 255anti-parallel
Strand 3
B
124 125anti-parallel
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There are 9 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
143 147first strand
Strand 2
B
114 118parallel
Strand 3
B
177 184parallel
Strand 4
B
213 220anti-parallel
Strand 5
B
13 20anti-parallel
Strand 6
B
233 242anti-parallel
Strand 7
B
379 387anti-parallel
Strand 8
B
368 375anti-parallel
Strand 9
B
301 304parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
24 26first strand
Strand 2
B
60 62anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
250 255first strand
Strand 2
B
258 263anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il