Analysis of interatomic Contacts of Structural Units in PDB entry:
3EVX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3EVX entry

There are 4 chains in PDB entry 3EVX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 5LYS 162
B
 ALA 5LYS 162
C
 ALA 5LYS 162
D
 ALA 5LYS 162
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 3EVX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 13Right-handed alpha
Helix 2
2
A
24 49Right-handed alpha
Helix 3
3
A
99 103Right-handed 310
Helix 4
4
A
110 114Right-handed 310
Helix 5
5
A
120 127Right-handed alpha
Helix 6
6
A
133 141Right-handed alpha
Helix 7
7
A
141 156Right-handed alpha
Helix 8
8
B
5 13Right-handed alpha
Helix 9
9
B
24 49Right-handed alpha
Helix 10
10
B
99 103Right-handed 310
Helix 11
11
B
110 114Right-handed 310
Helix 12
12
B
120 127Right-handed alpha
Helix 13
13
B
133 141Right-handed alpha
Helix 14
14
B
141 156Right-handed alpha
Helix 15
15
C
5 13Right-handed alpha
Helix 16
16
C
24 49Right-handed alpha
Helix 17
17
C
99 103Right-handed 310
Helix 18
18
C
110 114Right-handed 310
Helix 19
19
C
120 127Right-handed alpha
Helix 20
20
C
133 141Right-handed alpha
Helix 21
21
C
141 156Right-handed alpha
Helix 22
22
D
5 13Right-handed alpha
Helix 23
23
D
24 49Right-handed alpha
Helix 24
24
D
99 103Right-handed 310
Helix 25
25
D
110 114Right-handed 310
Helix 26
26
D
120 127Right-handed alpha
Helix 27
27
D
133 141Right-handed alpha
Helix 28
28
D
141 156Right-handed alpha
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There are 4 sheets in PDB entry 3EVX. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 58first strand
Strand 2
A
64 73anti-parallel
Strand 3
A
76 85anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
54 58first strand
Strand 2
B
64 73anti-parallel
Strand 3
B
76 85anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
54 58first strand
Strand 2
C
64 73anti-parallel
Strand 3
C
76 85anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
54 58first strand
Strand 2
D
64 73anti-parallel
Strand 3
D
76 85anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il