Analysis of interatomic Contacts of Structural Units in PDB entry:
3EWD


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3EWD entry

There is 1 chain in PDB entry 3EWD (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 7VAL 370
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 3EWD. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 19Right-handed 310
Helix 2
2
A
20 24Right-handed 310
Helix 3
3
A
25 36Right-handed alpha
Helix 4
4
A
46 48Right-handed 310
Helix 5
5
A
50 61Right-handed alpha
Helix 6
6
A
68 77Right-handed alpha
Helix 7
7
A
84 96Right-handed alpha
Helix 8
8
A
97 99Right-handed 310
Helix 9
9
A
101 120Right-handed alpha
Helix 10
10
A
129 136Right-handed alpha
Helix 11
11
A
140 159Right-handed alpha
Helix 12
12
A
175 189Right-handed alpha
Helix 13
13
A
204 207Right-handed 310
Helix 14
14
A
208 218Right-handed alpha
Helix 15
15
A
235 244Right-handed alpha
Helix 16
16
A
254 258Right-handed 310
Helix 17
17
A
259 270Right-handed alpha
Helix 18
18
A
276 283Right-handed alpha
Helix 19
19
A
288 292Right-handed 310
Helix 20
20
A
293 300Right-handed alpha
Helix 21
21
A
310 315Right-handed alpha
Helix 22
22
A
317 330Right-handed alpha
Helix 23
23
A
332 347Right-handed alpha
Helix 24
24
A
350 362Right-handed alpha
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There are 2 sheets in PDB entry 3EWD. Click on sheet of interest to get list of strands forming it: A, B,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 44first strand
Strand 2
A
121 128parallel
Strand 3
A
164 172parallel
Strand 4
A
193 199parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
223 226first strand
Strand 2
A
249 252parallel
Strand 3
A
272 275parallel
Strand 4
A
303 306parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il