Analysis of interatomic Contacts of Structural Units in PDB entry:
3EWF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3EWF entry

There are 8 chains in PDB entry 3EWF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 14VAL 377
B
 LEU 14VAL 377
C
 LEU 14VAL 377
D
 LEU 14VAL 377
I
 ARG 2HIS 3
J
 ARG 2HIS 3
K
 ARG 2HIS 3
L
 ARG 2HIS 3
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 60 helices in PDB entry 3EWF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
21 29Right-handed alpha
Helix 2
2
A
36 48Right-handed alpha
Helix 3
3
A
49 54Right-handed 310
Helix 4
4
A
63 68Right-handed alpha
Helix 5
5
A
72 84Right-handed alpha
Helix 6
6
A
92 97Right-handed 310
Helix 7
7
A
107 128Right-handed alpha
Helix 8
8
A
156 166Right-handed alpha
Helix 9
9
A
182 189Right-handed alpha
Helix 10
10
A
219 223Right-handed 310
Helix 11
11
A
236 256Right-handed alpha
Helix 12
12
A
280 293Right-handed alpha
Helix 13
13
A
307 323Right-handed alpha
Helix 14
14
A
336 341Right-handed 310
Helix 15
15
A
358 374Right-handed alpha
Helix 16
16
B
21 29Right-handed alpha
Helix 17
17
B
36 48Right-handed alpha
Helix 18
18
B
50 54Right-handed 310
Helix 19
19
B
63 68Right-handed alpha
Helix 20
20
B
72 84Right-handed alpha
Helix 21
21
B
92 97Right-handed 310
Helix 22
22
B
107 128Right-handed alpha
Helix 23
23
B
156 166Right-handed alpha
Helix 24
24
B
182 189Right-handed alpha
Helix 25
25
B
219 223Right-handed 310
Helix 26
26
B
236 256Right-handed alpha
Helix 27
27
B
280 293Right-handed alpha
Helix 28
28
B
307 323Right-handed alpha
Helix 29
29
B
336 341Right-handed 310
Helix 30
30
B
358 374Right-handed alpha
Helix 31
31
C
21 29Right-handed alpha
Helix 32
32
C
36 48Right-handed alpha
Helix 33
33
C
49 54Right-handed 310
Helix 34
34
C
63 68Right-handed alpha
Helix 35
35
C
72 84Right-handed alpha
Helix 36
36
C
92 97Right-handed 310
Helix 37
37
C
107 128Right-handed alpha
Helix 38
38
C
156 166Right-handed alpha
Helix 39
39
C
182 189Right-handed alpha
Helix 40
40
C
219 223Right-handed 310
Helix 41
41
C
236 256Right-handed alpha
Helix 42
42
C
280 293Right-handed alpha
Helix 43
43
C
307 323Right-handed alpha
Helix 44
44
C
336 341Right-handed 310
Helix 45
45
C
358 374Right-handed alpha
Helix 46
46
D
21 29Right-handed alpha
Helix 47
47
D
36 48Right-handed alpha
Helix 48
48
D
49 54Right-handed 310
Helix 49
49
D
63 68Right-handed alpha
Helix 50
50
D
72 84Right-handed alpha
Helix 51
51
D
92 97Right-handed 310
Helix 52
52
D
107 128Right-handed alpha
Helix 53
53
D
156 166Right-handed alpha
Helix 54
54
D
182 189Right-handed alpha
Helix 55
55
D
219 223Right-handed 310
Helix 56
56
D
236 256Right-handed alpha
Helix 57
57
D
280 293Right-handed alpha
Helix 58
58
D
307 323Right-handed alpha
Helix 59
59
D
336 341Right-handed 310
Helix 60
60
D
358 374Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 3EWF. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 57first strand
Strand 2
A
17 19parallel
Strand 3
A
133 136parallel
Strand 4
A
297 301parallel
Strand 5
A
259 263parallel
Strand 6
A
172 176parallel
Strand 7
A
195 202parallel
Strand 8
A
226 231parallel
Back to list of sheets
Back to top of page

There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
55 57first strand
Strand 2
B
17 19parallel
Strand 3
B
133 136parallel
Strand 4
B
297 301parallel
Strand 5
B
259 263parallel
Strand 6
B
172 176parallel
Strand 7
B
195 202parallel
Strand 8
B
226 231parallel
Back to list of sheets
Back to top of page

There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
55 57first strand
Strand 2
C
17 19parallel
Strand 3
C
133 136parallel
Strand 4
C
297 301parallel
Strand 5
C
259 263parallel
Strand 6
C
172 176parallel
Strand 7
C
195 202parallel
Strand 8
C
226 231parallel
Back to list of sheets
Back to top of page

There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
55 57first strand
Strand 2
D
17 19parallel
Strand 3
D
133 136parallel
Strand 4
D
297 301parallel
Strand 5
D
259 263parallel
Strand 6
D
172 176parallel
Strand 7
D
195 202parallel
Strand 8
D
226 231parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il