Analysis of interatomic Contacts of Structural Units in PDB entry:
3EY9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3EY9 entry

There are 2 chains in PDB entry 3EY9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 2ARG 572
B
 LYS 2ARG 572
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 63 helices in PDB entry 3EY9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 17Right-handed alpha
Helix 2
2
A
26 28Right-handed 310
Helix 3
3
A
29 40Right-handed alpha
Helix 4
4
A
49 65Right-handed alpha
Helix 5
5
A
75 80Right-handed alpha
Helix 6
6
A
81 91Right-handed alpha
Helix 7
7
A
103 107Right-handed 310
Helix 8
8
A
116 121Right-handed alpha
Helix 9
9
A
133 135Right-handed 310
Helix 10
10
A
136 151Right-handed alpha
Helix 11
11
A
161 166Right-handed alpha
Helix 12
12
A
187 200Right-handed alpha
Helix 13
13
A
210 213Right-handed 310
Helix 14
14
A
215 227Right-handed alpha
Helix 15
15
A
236 241Right-handed alpha
Helix 16
16
A
256 265Right-handed alpha
Helix 17
17
A
278 282Right-handed 310
Helix 18
18
A
294 298Right-handed 310
Helix 19
19
A
311 320Right-handed alpha
Helix 20
20
A
321 323Right-handed 310
Helix 21
21
A
329 343Right-handed alpha
Helix 22
22
A
358 370Right-handed alpha
Helix 23
23
A
381 391Right-handed alpha
Helix 24
24
A
410 422Right-handed alpha
Helix 25
25
A
433 439Right-handed alpha
Helix 26
26
A
442 449Right-handed alpha
Helix 27
27
A
486 494Right-handed alpha
Helix 28
28
A
503 505Right-handed 310
Helix 29
29
A
506 517Right-handed alpha
Helix 30
30
A
535 543Right-handed alpha
Helix 31
31
A
547 551Right-handed 310
Helix 32
32
B
4 17Right-handed alpha
Helix 33
33
B
26 28Right-handed 310
Helix 34
34
B
29 40Right-handed alpha
Helix 35
35
B
49 65Right-handed alpha
Helix 36
36
B
75 80Right-handed alpha
Helix 37
37
B
81 91Right-handed alpha
Helix 38
38
B
103 107Right-handed 310
Helix 39
39
B
116 121Right-handed alpha
Helix 40
40
B
133 135Right-handed 310
Helix 41
41
B
136 151Right-handed alpha
Helix 42
42
B
161 166Right-handed alpha
Helix 43
43
B
187 200Right-handed alpha
Helix 44
44
B
210 213Right-handed 310
Helix 45
45
B
215 227Right-handed alpha
Helix 46
46
B
236 241Right-handed alpha
Helix 47
47
B
256 265Right-handed alpha
Helix 48
48
B
278 282Right-handed 310
Helix 49
49
B
294 298Right-handed 310
Helix 50
50
B
311 320Right-handed alpha
Helix 51
51
B
321 323Right-handed 310
Helix 52
52
B
329 343Right-handed alpha
Helix 53
53
B
358 370Right-handed alpha
Helix 54
54
B
381 391Right-handed alpha
Helix 55
55
B
410 422Right-handed alpha
Helix 56
56
B
433 439Right-handed alpha
Helix 57
57
B
440 442Right-handed 310
Helix 58
58
B
443 449Right-handed alpha
Helix 59
59
B
486 494Right-handed alpha
Helix 60
60
B
503 505Right-handed 310
Helix 61
61
B
506 517Right-handed alpha
Helix 62
62
B
535 543Right-handed alpha
Helix 63
63
B
547 551Right-handed 310
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There are 8 sheets in PDB entry 3EY9. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 46first strand
Strand 2
A
20 24parallel
Strand 3
A
68 72parallel
Strand 4
A
95 101parallel
Strand 5
A
154 160parallel
Strand 6
A
127 130parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
247 250first strand
Strand 2
A
230 232parallel
Strand 3
A
204 208parallel
Strand 4
A
268 272parallel
Strand 5
A
287 292parallel
Strand 6
A
306 309parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
398 400first strand
Strand 2
A
375 378parallel
Strand 3
A
427 432parallel
Strand 4
A
454 459parallel
Strand 5
A
521 526parallel
Strand 6
A
497 501parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
553 555first strand
Strand 2
A
562 564anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
43 46first strand
Strand 2
B
20 24parallel
Strand 3
B
68 72parallel
Strand 4
B
95 101parallel
Strand 5
B
154 160parallel
Strand 6
B
127 130parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
247 250first strand
Strand 2
B
230 232parallel
Strand 3
B
204 208parallel
Strand 4
B
268 272parallel
Strand 5
B
287 292parallel
Strand 6
B
306 309parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
398 400first strand
Strand 2
B
375 378parallel
Strand 3
B
427 432parallel
Strand 4
B
454 459parallel
Strand 5
B
521 526parallel
Strand 6
B
497 501parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
553 555first strand
Strand 2
B
562 564anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il