Analysis of interatomic Contacts of Structural Units in PDB entry:
3EZ9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3EZ9 entry

There are 2 chains in PDB entry 3EZ9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 399
B
 MET 1GLU 399
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 40 helices in PDB entry 3EZ9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
7 19Right-handed alpha
Helix 2
2
A
22 34Right-handed alpha
Helix 3
3
A
43 50Right-handed alpha
Helix 4
4
A
54 68Right-handed alpha
Helix 5
5
A
86 97Right-handed alpha
Helix 6
6
A
101 106Right-handed alpha
Helix 7
7
A
126 136Right-handed alpha
Helix 8
8
A
137 144Right-handed 310
Helix 9
9
A
156 160Right-handed 310
Helix 10
10
A
174 182Right-handed alpha
Helix 11
11
A
184 191Right-handed alpha
Helix 12
12
A
209 216Right-handed alpha
Helix 13
13
A
216 225Right-handed alpha
Helix 14
14
A
232 238Right-handed alpha
Helix 15
15
A
239 246Right-handed 310
Helix 16
16
A
258 268Right-handed alpha
Helix 17
17
A
278 291Right-handed alpha
Helix 18
18
A
291 302Right-handed alpha
Helix 19
19
A
321 336Right-handed alpha
Helix 20
20
A
375 397Right-handed alpha
Helix 21
21
B
9 18Right-handed alpha
Helix 22
22
B
20 25Right-handed alpha
Helix 23
23
B
28 32Right-handed 310
Helix 24
24
B
43 48Right-handed alpha
Helix 25
25
B
54 68Right-handed alpha
Helix 26
26
B
86 97Right-handed alpha
Helix 27
27
B
101 106Right-handed alpha
Helix 28
28
B
127 136Right-handed alpha
Helix 29
29
B
137 141Right-handed 310
Helix 30
30
B
174 182Right-handed alpha
Helix 31
31
B
184 192Right-handed alpha
Helix 32
32
B
209 214Right-handed alpha
Helix 33
33
B
216 225Right-handed alpha
Helix 34
34
B
232 238Right-handed alpha
Helix 35
35
B
239 246Right-handed 310
Helix 36
36
B
258 268Right-handed alpha
Helix 37
37
B
278 300Right-handed alpha
Helix 38
38
B
301 303Right-handed 310
Helix 39
39
B
325 330Right-handed alpha
Helix 40
40
B
373 399Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 3EZ9. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 77first strand
Strand 2
A
80 83anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
194 195first strand
Strand 2
A
201 204anti-parallel
Strand 3
A
147 152parallel
Strand 4
A
248 253parallel
Strand 5
A
110 114parallel
Strand 6
A
270 275parallel
Strand 7
A
310 315parallel
Strand 8
A
339 340parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
74 77first strand
Strand 2
B
80 83anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
194 195first strand
Strand 2
B
201 204anti-parallel
Strand 3
B
147 152parallel
Strand 4
B
248 253parallel
Strand 5
B
111 114parallel
Strand 6
B
270 275parallel
Strand 7
B
310 315parallel
Strand 8
B
339 340parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il