Analysis of interatomic Contacts of Structural Units in PDB entry:
3EZO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3EZO entry

There is 1 chain in PDB entry 3EZO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 0LEU 306
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 3EZO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 21Right-handed 310
Helix 2
2
A
23 38Right-handed alpha
Helix 3
3
A
40 48Right-handed alpha
Helix 4
4
A
49 54Right-handed alpha
Helix 5
5
A
55 77Right-handed alpha
Helix 6
6
A
89 99Right-handed alpha
Helix 7
7
A
103 120Right-handed alpha
Helix 8
8
A
136 148Right-handed alpha
Helix 9
9
A
149 151Right-handed 310
Helix 10
10
A
170 183Right-handed alpha
Helix 11
11
A
199 201Right-handed 310
Helix 12
12
A
202 215Right-handed alpha
Helix 13
13
A
236 248Right-handed alpha
Helix 14
14
A
253 264Right-handed alpha
Helix 15
15
A
276 286Right-handed alpha
Helix 16
16
A
296 306Right-handed alpha
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There are 2 sheets in PDB entry 3EZO. Click on sheet of interest to get list of strands forming it: A, B,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
224 225first strand
Strand 2
A
84 87parallel
Strand 3
A
2 6parallel
Strand 4
A
268 272parallel
Strand 5
A
290 294parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
153 160first strand
Strand 2
A
163 169anti-parallel
Strand 3
A
127 133anti-parallel
Strand 4
A
187 190anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il