Analysis of interatomic Contacts of Structural Units in PDB entry:
3F02


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3F02 entry

There are 4 chains in PDB entry 3F02 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 24ARG 362
C
 VAL 365THR 399
B
 GLU 24ARG 362
D
 ALA 364MET 400
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 3F02. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
24 41Right-handed alpha
Helix 2
2
A
49 64Right-handed alpha
Helix 3
3
A
65 77Right-handed alpha
Helix 4
4
A
85 92Right-handed alpha
Helix 5
5
A
121 133Right-handed alpha
Helix 6
6
A
143 158Right-handed alpha
Helix 7
7
A
168 172Right-handed 310
Helix 8
8
A
195 199Right-handed 310
Helix 9
9
A
263 268Right-handed alpha
Helix 10
10
A
269 271Right-handed 310
Helix 11
11
A
272 283Right-handed alpha
Helix 12
12
A
303 311Right-handed alpha
Helix 13
13
A
313 317Right-handed 310
Helix 14
14
B
24 41Right-handed alpha
Helix 15
15
B
49 64Right-handed alpha
Helix 16
16
B
65 76Right-handed alpha
Helix 17
17
B
85 93Right-handed alpha
Helix 18
18
B
121 133Right-handed alpha
Helix 19
19
B
143 158Right-handed alpha
Helix 20
20
B
168 172Right-handed 310
Helix 21
21
B
195 199Right-handed 310
Helix 22
22
B
263 271Right-handed 310
Helix 23
23
B
272 283Right-handed alpha
Helix 24
24
B
303 310Right-handed alpha
Helix 25
25
B
313 317Right-handed 310
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There are 6 sheets in PDB entry 3F02. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 48first strand
Strand 2
C
388 394anti-parallel
Strand 3
C
376 382anti-parallel
Strand 4
A
251 257anti-parallel
Strand 5
A
238 245anti-parallel
Strand 6
A
211 229anti-parallel
Strand 7
A
200 205anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 48first strand
Strand 2
C
388 394anti-parallel
Strand 3
C
376 382anti-parallel
Strand 4
A
251 257anti-parallel
Strand 5
A
238 245anti-parallel
Strand 6
A
211 229anti-parallel
Strand 7
A
284 293anti-parallel
Strand 8
C
369 371parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
135 139first strand
Strand 2
A
105 115parallel
Strand 3
A
176 189anti-parallel
Strand 4
A
348 361anti-parallel
Strand 5
A
331 344anti-parallel
Strand 6
A
295 302anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
46 48first strand
Strand 2
D
388 394anti-parallel
Strand 3
D
376 382anti-parallel
Strand 4
B
251 257anti-parallel
Strand 5
B
238 245anti-parallel
Strand 6
B
211 229anti-parallel
Strand 7
B
200 205anti-parallel
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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
46 48first strand
Strand 2
D
388 394anti-parallel
Strand 3
D
376 382anti-parallel
Strand 4
B
251 257anti-parallel
Strand 5
B
238 245anti-parallel
Strand 6
B
211 229anti-parallel
Strand 7
B
284 293anti-parallel
Strand 8
D
369 371parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
135 139first strand
Strand 2
B
105 115parallel
Strand 3
B
176 189anti-parallel
Strand 4
B
348 361anti-parallel
Strand 5
B
331 344anti-parallel
Strand 6
B
295 302anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il