Analysis of interatomic Contacts of Structural Units in PDB entry:
3F0H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3F0H entry

There are 2 chains in PDB entry 3F0H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU -4GLN 186
A
 VAL 188LEU 357
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 3F0H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 20Right-handed alpha
Helix 2
2
A
28 47Right-handed alpha
Helix 3
3
A
60 73Right-handed alpha
Helix 4
4
A
85 98Right-handed alpha
Helix 5
5
A
114 120Right-handed alpha
Helix 6
6
A
143 154Right-handed alpha
Helix 7
7
A
172 177Right-handed alpha
Helix 8
8
A
201 210Right-handed alpha
Helix 9
9
A
219 228Right-handed alpha
Helix 10
10
A
237 254Right-handed alpha
Helix 11
11
A
255 275Right-handed alpha
Helix 12
12
A
300 312Right-handed alpha
Helix 13
13
A
320 324Right-handed 310
Helix 14
14
A
337 354Right-handed alpha
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There are 3 sheets in PDB entry 3F0H. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 3first strand
Strand 2
A
314 315parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 57first strand
Strand 2
A
196 200anti-parallel
Strand 3
A
180 184anti-parallel
Strand 4
A
157 161parallel
Strand 5
A
128 132parallel
Strand 6
A
79 83parallel
Strand 7
A
102 106parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
280 282first strand
Strand 2
A
291 296anti-parallel
Strand 3
A
328 331anti-parallel
Strand 4
A
317 318anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il