Analysis of interatomic Contacts of Structural Units in PDB entry:
3F1Z

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3F1Z entry

There are 10 chains in PDB entry 3F1Z (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 36	LYS 154
B	GLN 36	LYS 154
C	GLN 36	LYS 154
D	PRO 37	VAL 153
E	GLN 36	LYS 154
F	GLN 36	VAL 153
G	PRO 37	LYS 154
H	PRO 37	LYS 154
I	ASP 39	LYS 154
J	GLN 36	LYS 154

There are 40 helices in PDB entry 3F1Z. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	38	44	Right-handed alpha
Helix 2	2	A	50	60	Right-handed alpha
Helix 3	3	A	60	69	Right-handed alpha
Helix 4	4	A	117	122	Right-handed alpha
Helix 5	5	B	38	44	Right-handed alpha
Helix 6	6	B	50	60	Right-handed alpha
Helix 7	7	B	60	69	Right-handed alpha
Helix 8	8	B	117	124	Right-handed alpha
Helix 9	9	C	38	44	Right-handed alpha
Helix 10	10	C	50	60	Right-handed alpha
Helix 11	11	C	60	69	Right-handed alpha
Helix 12	12	C	117	124	Right-handed alpha
Helix 13	13	D	38	45	Right-handed alpha
Helix 14	14	D	49	60	Right-handed alpha
Helix 15	15	D	60	69	Right-handed alpha
Helix 16	16	D	117	123	Right-handed alpha
Helix 17	17	E	38	44	Right-handed alpha
Helix 18	18	E	50	60	Right-handed alpha
Helix 19	19	E	60	69	Right-handed alpha
Helix 20	20	E	117	124	Right-handed alpha
Helix 21	21	F	38	44	Right-handed alpha
Helix 22	22	F	50	60	Right-handed alpha
Helix 23	23	F	60	69	Right-handed alpha
Helix 24	24	F	117	124	Right-handed alpha
Helix 25	25	G	38	45	Right-handed alpha
Helix 26	26	G	50	60	Right-handed alpha
Helix 27	27	G	60	69	Right-handed alpha
Helix 28	28	G	117	123	Right-handed alpha
Helix 29	29	H	38	44	Right-handed alpha
Helix 30	30	H	50	60	Right-handed alpha
Helix 31	31	H	60	69	Right-handed alpha
Helix 32	32	H	117	124	Right-handed alpha
Helix 33	33	I	39	45	Right-handed alpha
Helix 34	34	I	50	60	Right-handed alpha
Helix 35	35	I	60	69	Right-handed alpha
Helix 36	36	I	117	124	Right-handed alpha
Helix 37	37	J	38	44	Right-handed alpha
Helix 38	38	J	50	60	Right-handed alpha
Helix 39	39	J	60	69	Right-handed alpha
Helix 40	40	J	117	123	Right-handed alpha

There are 10 sheets in PDB entry 3F1Z. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	47	49	first strand
Strand 2	A	72	86	parallel
Strand 3	A	129	135	anti-parallel
Strand 4	A	146	154	anti-parallel
Strand 5	A	109	114	parallel
Strand 6	A	92	99	anti-parallel
Strand 7	A	72	86	anti-parallel

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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	47	49	first strand
Strand 2	B	72	86	parallel
Strand 3	B	129	135	anti-parallel
Strand 4	B	146	152	anti-parallel
Strand 5	B	109	114	parallel
Strand 6	B	92	99	anti-parallel
Strand 7	B	72	86	anti-parallel

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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	47	49	first strand
Strand 2	C	72	86	parallel
Strand 3	C	129	135	anti-parallel
Strand 4	C	146	153	anti-parallel
Strand 5	C	109	114	parallel
Strand 6	C	92	99	anti-parallel
Strand 7	C	72	86	anti-parallel

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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	47	48	first strand
Strand 2	D	72	86	parallel
Strand 3	D	129	135	anti-parallel
Strand 4	D	146	152	anti-parallel
Strand 5	D	109	114	parallel
Strand 6	D	92	99	anti-parallel
Strand 7	D	72	86	anti-parallel

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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	47	49	first strand
Strand 2	E	72	86	parallel
Strand 3	E	129	135	anti-parallel
Strand 4	E	146	153	anti-parallel
Strand 5	E	109	114	parallel
Strand 6	E	92	99	anti-parallel
Strand 7	E	72	86	anti-parallel

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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	47	49	first strand
Strand 2	F	72	86	parallel
Strand 3	F	129	135	anti-parallel
Strand 4	F	146	152	anti-parallel
Strand 5	F	109	114	parallel
Strand 6	F	92	99	anti-parallel
Strand 7	F	72	86	anti-parallel

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There are 7 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	47	49	first strand
Strand 2	G	72	86	parallel
Strand 3	G	129	135	anti-parallel
Strand 4	G	146	152	anti-parallel
Strand 5	G	109	114	parallel
Strand 6	G	92	99	anti-parallel
Strand 7	G	72	86	anti-parallel

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There are 7 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	47	49	first strand
Strand 2	H	72	86	parallel
Strand 3	H	129	135	anti-parallel
Strand 4	H	146	153	anti-parallel
Strand 5	H	109	114	parallel
Strand 6	H	92	99	anti-parallel
Strand 7	H	72	86	anti-parallel

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There are 7 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	47	49	first strand
Strand 2	I	72	86	parallel
Strand 3	I	129	135	anti-parallel
Strand 4	I	146	152	anti-parallel
Strand 5	I	109	114	parallel
Strand 6	I	92	99	anti-parallel
Strand 7	I	72	86	anti-parallel

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There are 7 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	48	49	first strand
Strand 2	J	72	86	parallel
Strand 3	J	129	135	anti-parallel
Strand 4	J	146	152	anti-parallel
Strand 5	J	109	114	parallel
Strand 6	J	92	99	anti-parallel
Strand 7	J	72	86	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3F1Z

Analysis of interatomic Contacts of Structural Units in PDB entry:
3F1Z