Analysis of interatomic Contacts of Structural Units in PDB entry:
3F3G

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3F3G entry

There are 8 chains in PDB entry 3F3G (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	ALA 347
B	MET 1	ALA 347
C	ARG 40	ARG 561
D	LYS 39	GLU 554
E	MET 1	ALA 347
F	MET 1	ALA 347
G	LYS 39	GLU 554
H	LYS 39	ARG 561

There are112 helices in PDB entry 3F3G. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	65	69	Right-handed 310
Helix 2	2	A	118	122	Right-handed 310
Helix 3	3	B	65	69	Right-handed 310
Helix 4	4	B	118	122	Right-handed 310
Helix 5	5	C	103	118	Right-handed alpha
Helix 6	6	C	138	167	Right-handed alpha
Helix 7	7	C	169	190	Right-handed alpha
Helix 8	8	C	200	214	Right-handed alpha
Helix 9	9	C	220	225	Right-handed alpha
Helix 10	10	C	226	229	Right-handed 310
Helix 11	11	C	231	236	Right-handed alpha
Helix 12	12	C	238	241	Right-handed 310
Helix 13	13	C	242	255	Right-handed alpha
Helix 14	14	C	257	266	Right-handed alpha
Helix 15	15	C	272	277	Right-handed 310
Helix 16	16	C	278	293	Right-handed alpha
Helix 17	17	C	299	319	Right-handed alpha
Helix 18	18	C	325	340	Right-handed alpha
Helix 19	19	C	342	349	Right-handed alpha
Helix 20	20	C	352	364	Right-handed alpha
Helix 21	21	C	370	380	Right-handed alpha
Helix 22	22	C	390	400	Right-handed alpha
Helix 23	23	C	405	411	Right-handed alpha
Helix 24	24	C	413	427	Right-handed alpha
Helix 25	25	C	460	475	Right-handed alpha
Helix 26	26	C	481	491	Right-handed alpha
Helix 27	27	C	496	508	Right-handed alpha
Helix 28	28	C	509	511	Right-handed 310
Helix 29	29	C	515	529	Right-handed alpha
Helix 30	30	C	531	561	Right-handed alpha
Helix 31	31	D	103	118	Right-handed alpha
Helix 32	32	D	138	167	Right-handed alpha
Helix 33	33	D	169	190	Right-handed alpha
Helix 34	34	D	200	214	Right-handed alpha
Helix 35	35	D	220	225	Right-handed alpha
Helix 36	36	D	226	229	Right-handed 310
Helix 37	37	D	238	241	Right-handed 310
Helix 38	38	D	242	255	Right-handed alpha
Helix 39	39	D	257	266	Right-handed alpha
Helix 40	40	D	272	277	Right-handed 310
Helix 41	41	D	278	293	Right-handed alpha
Helix 42	42	D	299	319	Right-handed alpha
Helix 43	43	D	325	340	Right-handed alpha
Helix 44	44	D	342	349	Right-handed alpha
Helix 45	45	D	352	364	Right-handed alpha
Helix 46	46	D	370	380	Right-handed alpha
Helix 47	47	D	390	400	Right-handed alpha
Helix 48	48	D	405	411	Right-handed alpha
Helix 49	49	D	413	427	Right-handed alpha
Helix 50	50	D	460	474	Right-handed alpha
Helix 51	51	D	480	491	Right-handed alpha
Helix 52	52	D	496	508	Right-handed alpha
Helix 53	53	D	509	511	Right-handed 310
Helix 54	54	D	515	529	Right-handed alpha
Helix 55	55	D	531	551	Right-handed alpha
Helix 56	56	E	65	69	Right-handed 310
Helix 57	57	E	118	122	Right-handed 310
Helix 58	58	F	65	69	Right-handed 310
Helix 59	59	F	118	122	Right-handed 310
Helix 60	60	G	103	118	Right-handed alpha
Helix 61	61	G	138	167	Right-handed alpha
Helix 62	62	G	169	190	Right-handed alpha
Helix 63	63	G	200	214	Right-handed alpha
Helix 64	64	G	220	225	Right-handed alpha
Helix 65	65	G	226	229	Right-handed 310
Helix 66	66	G	238	241	Right-handed 310
Helix 67	67	G	242	255	Right-handed alpha
Helix 68	68	G	257	266	Right-handed alpha
Helix 69	69	G	272	277	Right-handed 310
Helix 70	70	G	278	293	Right-handed alpha
Helix 71	71	G	299	319	Right-handed alpha
Helix 72	72	G	325	340	Right-handed alpha
Helix 73	73	G	342	349	Right-handed alpha
Helix 74	74	G	352	364	Right-handed alpha
Helix 75	75	G	370	380	Right-handed alpha
Helix 76	76	G	390	400	Right-handed alpha
Helix 77	77	G	402	404	Right-handed 310
Helix 78	78	G	405	411	Right-handed alpha
Helix 79	79	G	413	427	Right-handed alpha
Helix 80	80	G	460	475	Right-handed alpha
Helix 81	81	G	480	491	Right-handed alpha
Helix 82	82	G	496	508	Right-handed alpha
Helix 83	83	G	515	529	Right-handed alpha
Helix 84	84	G	531	549	Right-handed alpha
Helix 85	85	H	103	118	Right-handed alpha
Helix 86	86	H	138	167	Right-handed alpha
Helix 87	87	H	169	190	Right-handed alpha
Helix 88	88	H	200	214	Right-handed alpha
Helix 89	89	H	220	225	Right-handed alpha
Helix 90	90	H	226	229	Right-handed 310
Helix 91	91	H	231	236	Right-handed alpha
Helix 92	92	H	238	241	Right-handed 310
Helix 93	93	H	242	255	Right-handed alpha
Helix 94	94	H	257	266	Right-handed alpha
Helix 95	95	H	272	277	Right-handed 310
Helix 96	96	H	278	293	Right-handed alpha
Helix 97	97	H	299	319	Right-handed alpha
Helix 98	98	H	325	340	Right-handed alpha
Helix 99	99	H	342	349	Right-handed alpha
Helix 100	100	H	352	364	Right-handed alpha
Helix 101	101	H	370	380	Right-handed alpha
Helix 102	102	H	390	400	Right-handed alpha
Helix 103	103	H	402	404	Right-handed 310
Helix 104	104	H	405	411	Right-handed alpha
Helix 105	105	H	413	427	Right-handed alpha
Helix 106	106	H	460	467	Right-handed alpha
Helix 107	107	H	468	475	Right-handed alpha
Helix 108	108	H	481	491	Right-handed alpha
Helix 109	109	H	496	508	Right-handed alpha
Helix 110	110	H	509	511	Right-handed 310
Helix 111	111	H	515	530	Right-handed alpha
Helix 112	112	H	531	561	Right-handed alpha

There are 28 sheets in PDB entry 3F3G. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	16	17	first strand
Strand 2	A	23	27	anti-parallel
Strand 3	A	32	38	anti-parallel
Strand 4	A	45	52	anti-parallel

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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	58	62	first strand
Strand 2	A	71	76	anti-parallel
Strand 3	A	81	86	anti-parallel
Strand 4	A	98	104	anti-parallel

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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	111	116	first strand
Strand 2	A	124	129	anti-parallel
Strand 3	A	134	138	anti-parallel
Strand 4	A	149	150	anti-parallel

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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	169	173	first strand
Strand 2	A	182	187	anti-parallel
Strand 3	A	192	196	anti-parallel
Strand 4	A	202	207	anti-parallel

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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	217	220	first strand
Strand 2	A	229	234	anti-parallel
Strand 3	A	240	247	anti-parallel
Strand 4	A	292	300	anti-parallel

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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	307	312	first strand
Strand 2	A	319	323	anti-parallel
Strand 3	A	328	333	anti-parallel
Strand 4	A	339	345	anti-parallel
Strand 5	C	47	49	parallel
Strand 6	C	41	42	anti-parallel

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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	16	17	first strand
Strand 2	B	23	27	anti-parallel
Strand 3	B	32	38	anti-parallel
Strand 4	B	45	52	anti-parallel

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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	58	62	first strand
Strand 2	B	71	76	anti-parallel
Strand 3	B	81	86	anti-parallel
Strand 4	B	98	104	anti-parallel

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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	111	116	first strand
Strand 2	B	124	129	anti-parallel
Strand 3	B	134	138	anti-parallel
Strand 4	B	149	150	anti-parallel

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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	169	173	first strand
Strand 2	B	182	187	anti-parallel
Strand 3	B	192	196	anti-parallel
Strand 4	B	202	207	anti-parallel

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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	215	220	first strand
Strand 2	B	229	235	anti-parallel
Strand 3	B	240	247	anti-parallel
Strand 4	B	292	300	anti-parallel

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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	307	312	first strand
Strand 2	B	319	323	anti-parallel
Strand 3	B	328	333	anti-parallel
Strand 4	B	339	345	anti-parallel
Strand 5	D	48	49	parallel

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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	67	74	first strand
Strand 2	C	77	82	anti-parallel

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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	67	74	first strand
Strand 2	D	77	82	anti-parallel

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There are 4 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	16	17	first strand
Strand 2	E	23	27	anti-parallel
Strand 3	E	32	38	anti-parallel
Strand 4	E	45	52	anti-parallel

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There are 4 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	58	62	first strand
Strand 2	E	71	76	anti-parallel
Strand 3	E	81	86	anti-parallel
Strand 4	E	98	104	anti-parallel

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There are 4 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	111	116	first strand
Strand 2	E	124	129	anti-parallel
Strand 3	E	134	138	anti-parallel
Strand 4	E	149	150	anti-parallel

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There are 4 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	169	173	first strand
Strand 2	E	182	187	anti-parallel
Strand 3	E	192	196	anti-parallel
Strand 4	E	202	207	anti-parallel

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There are 4 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	217	220	first strand
Strand 2	E	229	234	anti-parallel
Strand 3	E	240	247	anti-parallel
Strand 4	E	292	300	anti-parallel

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There are 5 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	307	312	first strand
Strand 2	E	319	323	anti-parallel
Strand 3	E	328	333	anti-parallel
Strand 4	E	339	345	anti-parallel
Strand 5	G	47	49	parallel

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There are 4 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	16	17	first strand
Strand 2	F	23	27	anti-parallel
Strand 3	F	32	38	anti-parallel
Strand 4	F	45	52	anti-parallel

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There are 4 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	58	62	first strand
Strand 2	F	71	76	anti-parallel
Strand 3	F	81	86	anti-parallel
Strand 4	F	98	104	anti-parallel

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There are 4 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	111	116	first strand
Strand 2	F	124	129	anti-parallel
Strand 3	F	134	138	anti-parallel
Strand 4	F	149	150	anti-parallel

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There are 4 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	169	173	first strand
Strand 2	F	182	187	anti-parallel
Strand 3	F	192	196	anti-parallel
Strand 4	F	202	207	anti-parallel

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There are 4 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	215	220	first strand
Strand 2	F	229	235	anti-parallel
Strand 3	F	240	247	anti-parallel
Strand 4	F	292	300	anti-parallel

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There are 5 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	307	312	first strand
Strand 2	F	319	323	anti-parallel
Strand 3	F	328	333	anti-parallel
Strand 4	F	339	345	anti-parallel
Strand 5	H	47	49	parallel

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There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	67	74	first strand
Strand 2	G	77	82	anti-parallel

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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	67	74	first strand
Strand 2	H	77	82	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3F3G

Analysis of interatomic Contacts of Structural Units in PDB entry:
3F3G