Analysis of interatomic Contacts of Structural Units in PDB entry:
3F4K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3F4K entry

There is 1 chain in PDB entry 3F4K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 4ARG 257
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 11 helices in PDB entry 3F4K. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
7 11Right-handed 310
Helix 2
2
A
12 21Right-handed alpha
Helix 3
3
A
30 39Right-handed alpha
Helix 4
4
A
58 68Right-handed alpha
Helix 5
5
A
78 92Right-handed alpha
Helix 6
6
A
128 138Right-handed alpha
Helix 7
7
A
159 170Right-handed alpha
Helix 8
8
A
175 186Right-handed alpha
Helix 9
9
A
197 201Right-handed 310
Helix 10
10
A
206 221Right-handed alpha
Helix 11
11
A
223 244Right-handed alpha
Back to top of page

There is 1 sheet ( A) in PDB entry 3F4K.

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
98 102first strand
Strand 2
A
71 76parallel
Strand 3
A
49 53parallel
Strand 4
A
115 121parallel
Strand 5
A
140 153parallel
Strand 6
A
247 256anti-parallel
Strand 7
A
188 195anti-parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il