Analysis of interatomic Contacts of Structural Units in PDB entry:
3F6S


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3F6S entry

There are 8 chains in PDB entry 3F6S (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2LEU 148
B
 SER 2LEU 148
D
 SER 2LEU 148
E
 SER 2LEU 148
F
 SER 2LEU 148
H
 SER 2LEU 148
I
 SER 2LEU 148
G
 SER 2LEU 148
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 3F6S. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 28Right-handed alpha
Helix 2
2
A
68 76Right-handed alpha
Helix 3
3
A
77 81Right-handed 310
Helix 4
4
A
103 115Right-handed alpha
Helix 5
5
A
129 132Right-handed 310
Helix 6
6
A
133 148Right-handed alpha
Helix 7
7
B
13 29Right-handed alpha
Helix 8
8
B
68 76Right-handed alpha
Helix 9
9
B
77 81Right-handed 310
Helix 10
10
B
103 115Right-handed alpha
Helix 11
11
B
129 132Right-handed 310
Helix 12
12
B
133 146Right-handed alpha
Helix 13
13
D
13 29Right-handed alpha
Helix 14
14
D
39 41Right-handed 310
Helix 15
15
D
68 76Right-handed alpha
Helix 16
16
D
77 81Right-handed 310
Helix 17
17
D
103 115Right-handed alpha
Helix 18
18
D
129 132Right-handed 310
Helix 19
19
D
133 146Right-handed alpha
Helix 20
20
E
13 28Right-handed alpha
Helix 21
21
E
68 76Right-handed alpha
Helix 22
22
E
77 81Right-handed 310
Helix 23
23
E
103 115Right-handed alpha
Helix 24
24
E
129 132Right-handed 310
Helix 25
25
E
133 148Right-handed alpha
Helix 26
26
F
13 28Right-handed alpha
Helix 27
27
F
39 41Right-handed 310
Helix 28
28
F
68 76Right-handed alpha
Helix 29
29
F
77 82Right-handed alpha
Helix 30
30
F
103 115Right-handed alpha
Helix 31
31
F
133 146Right-handed alpha
Helix 32
32
H
13 29Right-handed alpha
Helix 33
33
H
39 41Right-handed 310
Helix 34
34
H
68 76Right-handed alpha
Helix 35
35
H
77 82Right-handed alpha
Helix 36
36
H
103 114Right-handed alpha
Helix 37
37
H
133 146Right-handed alpha
Helix 38
38
I
13 29Right-handed alpha
Helix 39
39
I
39 41Right-handed 310
Helix 40
40
I
68 76Right-handed alpha
Helix 41
41
I
77 81Right-handed 310
Helix 42
42
I
103 115Right-handed alpha
Helix 43
43
I
129 132Right-handed 310
Helix 44
44
I
133 148Right-handed alpha
Helix 45
45
G
13 28Right-handed alpha
Helix 46
46
G
68 76Right-handed alpha
Helix 47
47
G
77 81Right-handed 310
Helix 48
48
G
103 115Right-handed alpha
Helix 49
49
G
129 132Right-handed 310
Helix 50
50
G
133 148Right-handed alpha
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There are 15 sheets in PDB entry 3F6S. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 37first strand
Strand 2
A
3 9parallel
Strand 3
A
52 57parallel
Strand 4
A
87 94parallel
Strand 5
A
118 119parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 37first strand
Strand 2
A
3 9parallel
Strand 3
A
52 57parallel
Strand 4
A
87 94parallel
Strand 5
A
124 127parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
32 37first strand
Strand 2
B
3 9parallel
Strand 3
B
52 57parallel
Strand 4
B
87 94parallel
Strand 5
B
118 119parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
32 37first strand
Strand 2
B
3 9parallel
Strand 3
B
52 57parallel
Strand 4
B
87 94parallel
Strand 5
B
124 127parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
32 37first strand
Strand 2
D
3 9parallel
Strand 3
D
52 57parallel
Strand 4
D
87 93parallel
Strand 5
D
118 119parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
32 37first strand
Strand 2
D
3 9parallel
Strand 3
D
52 57parallel
Strand 4
D
87 93parallel
Strand 5
D
124 126parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
32 37first strand
Strand 2
E
3 9parallel
Strand 3
E
52 57parallel
Strand 4
E
87 94parallel
Strand 5
E
118 119parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
32 37first strand
Strand 2
E
3 9parallel
Strand 3
E
52 57parallel
Strand 4
E
87 94parallel
Strand 5
E
124 127parallel
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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
32 37first strand
Strand 2
F
3 9parallel
Strand 3
F
52 57parallel
Strand 4
F
87 91parallel
Strand 5
F
118 119parallel
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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
32 37first strand
Strand 2
H
3 9parallel
Strand 3
H
52 57parallel
Strand 4
H
87 94parallel
Strand 5
H
118 119parallel
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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
32 37first strand
Strand 2
H
3 9parallel
Strand 3
H
52 57parallel
Strand 4
H
87 94parallel
Strand 5
H
124 127parallel
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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
32 37first strand
Strand 2
I
3 9parallel
Strand 3
I
52 57parallel
Strand 4
I
87 93parallel
Strand 5
I
118 119parallel
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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
32 37first strand
Strand 2
I
3 9parallel
Strand 3
I
52 57parallel
Strand 4
I
87 93parallel
Strand 5
I
124 126parallel
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There are 5 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
32 37first strand
Strand 2
G
3 9parallel
Strand 3
G
52 57parallel
Strand 4
G
87 94parallel
Strand 5
G
118 119parallel
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There are 5 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
32 37first strand
Strand 2
G
3 9parallel
Strand 3
G
52 57parallel
Strand 4
G
87 94parallel
Strand 5
G
124 127parallel
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