Analysis of interatomic Contacts of Structural Units in PDB entry:
3F6T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3F6T entry

There are 4 chains in PDB entry 3F6T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 15SER 311
A
 LEU 313LYS 529
B
 PHE 15SER 311
B
 LEU 313ASN 531
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 58 helices in PDB entry 3F6T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
18 28Right-handed alpha
Helix 2
2
A
31 37Right-handed alpha
Helix 3
3
A
47 65Right-handed alpha
Helix 4
4
A
81 90Right-handed alpha
Helix 5
5
A
95 111Right-handed alpha
Helix 6
6
A
115 129Right-handed alpha
Helix 7
7
A
139 155Right-handed alpha
Helix 8
8
A
160 162Right-handed 310
Helix 9
9
A
171 186Right-handed alpha
Helix 10
10
A
202 207Right-handed alpha
Helix 11
11
A
208 214Right-handed 310
Helix 12
12
A
232 240Right-handed alpha
Helix 13
13
A
261 275Right-handed alpha
Helix 14
14
A
286 290Right-handed 310
Helix 15
15
A
295 300Right-handed alpha
Helix 16
16
A
310 315Right-handed alpha
Helix 17
17
A
316 319Right-handed 310
Helix 18
18
A
330 338Right-handed alpha
Helix 19
19
A
340 353Right-handed alpha
Helix 20
20
A
357 361Right-handed 310
Helix 21
21
A
362 372Right-handed alpha
Helix 22
22
A
376 380Right-handed 310
Helix 23
23
A
383 399Right-handed alpha
Helix 24
24
A
402 406Right-handed 310
Helix 25
25
A
408 430Right-handed alpha
Helix 26
26
A
448 457Right-handed alpha
Helix 27
27
A
457 468Right-handed alpha
Helix 28
28
A
469 481Right-handed alpha
Helix 29
29
A
508 529Right-handed alpha
Helix 30
30
B
18 26Right-handed alpha
Helix 31
31
B
27 30Right-handed 310
Helix 32
32
B
31 37Right-handed alpha
Helix 33
33
B
47 65Right-handed alpha
Helix 34
34
B
81 90Right-handed alpha
Helix 35
35
B
95 111Right-handed alpha
Helix 36
36
B
115 129Right-handed alpha
Helix 37
37
B
139 155Right-handed alpha
Helix 38
38
B
160 162Right-handed 310
Helix 39
39
B
171 186Right-handed alpha
Helix 40
40
B
202 207Right-handed alpha
Helix 41
41
B
208 214Right-handed 310
Helix 42
42
B
232 241Right-handed alpha
Helix 43
43
B
261 275Right-handed alpha
Helix 44
44
B
286 290Right-handed 310
Helix 45
45
B
295 300Right-handed alpha
Helix 46
46
B
310 315Right-handed alpha
Helix 47
47
B
330 338Right-handed alpha
Helix 48
48
B
340 353Right-handed alpha
Helix 49
49
B
357 361Right-handed 310
Helix 50
50
B
362 372Right-handed alpha
Helix 51
51
B
376 380Right-handed 310
Helix 52
52
B
383 401Right-handed alpha
Helix 53
53
B
402 406Right-handed 310
Helix 54
54
B
408 430Right-handed alpha
Helix 55
55
B
448 457Right-handed alpha
Helix 56
56
B
457 467Right-handed alpha
Helix 57
57
B
469 481Right-handed alpha
Helix 58
58
B
508 531Right-handed alpha
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There are 7 sheets in PDB entry 3F6T. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
45 46first strand
Strand 2
B
73 74anti-parallel
Strand 3
B
69 70anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 70first strand
Strand 2
A
73 74anti-parallel
Strand 3
B
45 46anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
164 170first strand
Strand 2
A
321 327anti-parallel
Strand 3
A
304 309anti-parallel
Strand 4
A
279 283parallel
Strand 5
A
244 250parallel
Strand 6
A
194 198parallel
Strand 7
A
215 219parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
443 447first strand
Strand 2
A
497 501anti-parallel
Strand 3
A
489 491anti-parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
164 170first strand
Strand 2
B
321 327anti-parallel
Strand 3
B
304 309anti-parallel
Strand 4
B
279 283parallel
Strand 5
B
244 250parallel
Strand 6
B
194 198parallel
Strand 7
B
215 219parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
223 224first strand
Strand 2
B
230 231anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
443 447first strand
Strand 2
B
497 501anti-parallel
Strand 3
B
489 491anti-parallel
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